Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01350 ATGGGGGGATCTGGAAACATGGTAGTCGAAGGAGAGTCTGAGTCGCCGAAGGCCTCATTAGAGGAGGAGGAATCGGTTACCCACTATGAGCATTGTGCAAGTGTTACTGAAGAAAACGAAGTGGGCTATTTTAGTGATAGCTCAGGTAATGAGTTGCTTGGCGGAGATTTGGGCAATGAGGCAGACTCGCATGAGTTGTGTGGTGAGCAGTTTTATGACAATTGGGAAGCAAGAGCTGTTGATGGGATTGTGGACATTGGATCAATTAATTTCAAAGAAGTAACCGTAGATGTGTTGAAGAGACTACACTTTCCAGACTTGGAAGTTGCAATTTCATTTTACAACTTATACGCCAAGATGAATGGGTATGCTGCAAGAAGGAATAGGTTGCGCTGGAACATGAATAACGAGCCCACACAACGATCATTTGTCTGCTTTAGAGAGGGTTTTAGACGAGTAAGAGTGAAAAAGATAGCTAATCGACGTAAAAGGGAGCCACGACCTGAGACTAGATGTGGGTGTGAGACTGAGATGCGGGTTCAATTCCATAAGGATAGTGGGAGATGA 567 0.4462 MGGSGNMVVEGESESPKASLEEEESVTHYEHCASVTEENEVGYFSDSSGNELLGGDLGNEADSHELCGEQFYDNWEARAVDGIVDIGSINFKEVTVDVLKRLHFPDLEVAISFYNLYAKMNGYAARRNRLRWNMNNEPTQRSFVCFREGFRRVRVKKIANRRKREPRPETRCGCETEMRVQFHKDSGR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01350 188 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 72 187 - -
Aip04g01350 188 MobiDBLite consensus disorder prediction 1 23 - -
Aip04g01350 188 Pfam FAR1 DNA-binding domain 112 185 IPR004330 -
Aip04g01350 188 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 72 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01350 Aip-Chr4 24833739 24834478 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g01350 FAR1 1.3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01350 - - adu:107496430 174.866