Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01336 ATGGTGTTGGGCGTCCTAGTGAGTTTGTATTTAAAATGCCGCCGAAGTTTGAAGGAGGACATACCTAAGTTCCAGACGCATCACCAGCAACAACCACAATTTGCTACGCTCACTATAGAAAAATTCTTGAATGATATCGAAAGGGAGAAGCCAGTAAGATTCACTGATCAGCAGTTACAAATTGCAACCGATAACTACTCTAATTTGTTGGGATCAGGAGGTTTCGGTGCTGTTTACAAAGGGATTTTCAATGGCGCCATGGTAGCCGTGAAGGTCCTGCATGGAAATTGTGACAAAAGAAGTCAAGCACAGTTTATGGCAGAAATGGGAACACTTGGTAAAATCCACCATTTCAATCTTGTTCGGTTATATGGCTTTTGTTTTGAAGAAAACTTGACAGCATTGGTTTATGAGTACATGGGAAATGGATCTCTTGACAAGTATTTGTTAAAAGAAAACAACACGTTAGGATTTGAAAAGCTTCATGAGATAGCGGTTGGAACTGCAAGAGGCATTGCTTATTTGCATGAAGACTGCCAACAAAGAATTATTCACTATGACATTAAACCGGCCAATATTTTATTGGACCGGAATTTCAATCCTAAGGTTGCGGATTTTGGTTTGGCAATGATTTATAACAGGGATAACACTCATATATCTATGACCGGTGGAGGAGGAGGCAGGGGAACCCCCGGTTACGCTGCGCCGGAGCTATGGATGCCGTTCCCGGTGACTCACAAATGCGATGTCTATAGCTTTGGAATGTTGTTGTTTGAGATCATAGGTCGGAGAAGAAATGTTGATAATAATGTTCCTGAAAGCCAAGAGTGGTTTCCAATGTGGGTTTGGAAAAAATTTGATGGTGGAGAATTACAGGATTCAACATTAGTGTCTGAATTATTGTTGGAGAAACATAAGGAGATGGTAGAAAGAATGATTAAGGTAGCTTTGTGGTGTGTTCAGTATAGGCCAGAATCAAGGCCTATGATGAGTGCTGTTGTGAAAATGTTGGAAGGCTCTGAAGAAATTCCACAACCTTTGAACCCATTTCAATACTTGATGGACAATGGTTTCACTACTGCTCATGATCATTCACCTCAAGATTCATCAAATATGTACACTACTAGTACAACTTCAAGTGGTAGTGTGATTGTGGTGGAATCCAATAATATTGTATCTACTACTCCAATCAAGAGTCATAATGAGATCGAATTGTTAGTCTCTAGCTAG 1230 0.4024 MVLGVLVSLYLKCRRSLKEDIPKFQTHHQQQPQFATLTIEKFLNDIEREKPVRFTDQQLQIATDNYSNLLGSGGFGAVYKGIFNGAMVAVKVLHGNCDKRSQAQFMAEMGTLGKIHHFNLVRLYGFCFEENLTALVYEYMGNGSLDKYLLKENNTLGFEKLHEIAVGTARGIAYLHEDCQQRIIHYDIKPANILLDRNFNPKVADFGLAMIYNRDNTHISMTGGGGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNVDNNVPESQEWFPMWVWKKFDGGELQDSTLVSELLLEKHKEMVERMIKVALWCVQYRPESRPMMSAVVKMLEGSEEIPQPLNPFQYLMDNGFTTAHDHSPQDSSNMYTTSTTSSGSVIVVESNNIVSTTPIKSHNEIELLVSS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01336 409 ProSiteProfiles Protein kinase domain profile. 64 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01336 409 SUPERFAMILY Protein kinase-like (PK-like) 49 338 IPR011009 -
Aip04g01336 409 Pfam Protein tyrosine and serine/threonine kinase 68 337 IPR001245 GO:0004672|GO:0006468
Aip04g01336 409 Gene3D Phosphorylase Kinase; domain 1 38 139 - -
Aip04g01336 409 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 405 IPR045874 GO:0004672
Aip04g01336 409 ProSitePatterns Protein kinases ATP-binding region signature. 70 91 IPR017441 GO:0005524
Aip04g01336 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Aip04g01336 409 SMART serkin_6 64 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01336 409 Gene3D Transferase(Phosphotransferase) domain 1 140 346 - -
Aip04g01336 409 PANTHER PUTATIVE-RELATED 23 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01336 Aip-Chr4 23950930 23952159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01336 50 385 Receptor kinase-like Gene Family AT1G56120 42.647 1.39e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Aip04g01336 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01336 - - gmx:100803355 538.11