Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01322 ATGACACTATTTCAACCCAGTCCCCAACTCTTTCACCCTGGCTACCCTAATCTAATCGATCGAGCTCACATCCCCTTTCACCCTGGCCACCCTAATCGATCAAGCTCACAACAGCACCGCAGCCCCACTCCCCCGTTCCCCTCTCCAACACACACAACACAATACTCACACGCACCACCTCACCCACGCGGAAGAGGAGAGCTCGAGGAAGGAGACGCCACCTTGCTGCCAGCTCCGTCGAAGACCAGCCCGCCGCCGCTGTCGAGTCAAACCCGAGAGAGTGTGTGCAACGATGAGAGAGGAGGAGCCGTCACCAAACGCGTCGTCGCCGCTGGAGGAGCTTCGCTCTTCGCCGCCGCCGAGGAGGGGAAAGAGGAGCTGCTCCCTCGCCAGTCACCGTCGTGCTTCCTGGTTGCCGATGAGGGAGCCGCGAGAACCGTTGCAGCTGTTGACTGTAAGCACTCCAAATCATTGAAAAAGGGTGCTATAACAAAGAGAATGACTGCAATTGAAGAAATGGCCGGAATGGATGTCCTATGCAGTGATAAAACAGGCACATTAACTCTCAACAAGCTTACAGTGGACAAGAATCTAATTGAGGTCTTTGCTGATGGACTTAATCAGGACATGGTTGTACTTATGGCTGCAAGGGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCAATTGTATCTATGTTAGTAGACCCAAAGGAGGAATTAATTGTTTGTAACCAAGAAGGGAAACGGATCACATCTCATACTCTTGAAAAAAAAAATACCCTTACAGAGAATGCAAATGGTTTTGCTGGTGTCTTTCCTGAGCACAAATATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGAGTGAATGATGCACCAGCTTTGAAGATAGCAGACATAGGTATCGCTGTAGCAGATGCAACAGATGCTGCAAGAAGTGCCTCTGATATAGTTCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCAATTTTCCAAAGAATGAAAAACTACACAGTAATCCCCTAA 1077 0.4875 MTLFQPSPQLFHPGYPNLIDRAHIPFHPGHPNRSSSQQHRSPTPPFPSPTHTTQYSHAPPHPRGRGELEEGDATLLPAPSKTSPPPLSSQTRESVCNDERGGAVTKRVVAAGGASLFAAAEEGKEELLPRQSPSCFLVADEGAARTVAAVDCKHSKSLKKGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFADGLNQDMVVLMAARASRLENQDAIDCAIVSMLVDPKEELIVCNQEGKRITSHTLEKKNTLTENANGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVIP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01322 358 PANTHER CALCIUM-TRANSPORTING ATPASE 157 241 - -
Aip04g01322 358 PANTHER CALCIUM-TRANSPORTING ATPASE 262 356 - -
Aip04g01322 358 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 268 355 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip04g01322 358 PRINTS H+-transporting ATPase (proton pump) signature 267 283 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip04g01322 358 PRINTS H+-transporting ATPase (proton pump) signature 295 311 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip04g01322 358 PRINTS H+-transporting ATPase (proton pump) signature 326 351 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip04g01322 358 PANTHER PLASMA MEMBRANE ATPASE 157 241 - -
Aip04g01322 358 PANTHER PLASMA MEMBRANE ATPASE 262 356 - -
Aip04g01322 358 MobiDBLite consensus disorder prediction 1 100 - -
Aip04g01322 358 ProSitePatterns E1-E2 ATPases phosphorylation site. 182 188 IPR018303 -
Aip04g01322 358 Gene3D - 257 332 IPR023214 -
Aip04g01322 358 Gene3D - 177 191 IPR023214 -
Aip04g01322 358 SUPERFAMILY HAD-like 173 349 IPR036412 -
Aip04g01322 358 PRINTS P-type cation-transporting ATPase superfamily signature 318 330 - -
Aip04g01322 358 PRINTS P-type cation-transporting ATPase superfamily signature 295 314 - -
Aip04g01322 358 PRINTS P-type cation-transporting ATPase superfamily signature 230 241 - -
Aip04g01322 358 PRINTS P-type cation-transporting ATPase superfamily signature 96 110 - -
Aip04g01322 358 Pfam haloacid dehalogenase-like hydrolase 261 309 - -
Aip04g01322 358 Gene3D - 159 176 - -
Aip04g01322 358 Gene3D - 333 356 - -
Aip04g01322 358 Gene3D - 192 241 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01322 Aip-Chr4 23635248 23638538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01322 159 356 Primary Pumps ATPases AT4G11730 48.617 4.22e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01322 K01535 - ahf:112742714 295.819