Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01276 ATGCTTCACCAAGTAACAAACCCTAATATTCCATACATTTCTCTAGAATTATCTTTGATTTCTAGTAGCTTCCAGCAAAGCAAAGCTACCAATCATGGTGGATCAAGAAATTTGAAGGCAAGAAAGGAACCAAACCAAAGAAATCCCAAGAAAAGCTGCTTCAGCAGGTGGGGGTGTTCAACATCATTGGAGCTTTACGACAATCCATGGAAGATAAAGAAAAAGCTGACGACGAGCGACCTCGGGAAGCTGAACCGGCTCCTCTTCGGGTCCGATTTGCTGGAGAACCTGATGGTTCCGCTGCTGAGCATAGAAGCGCAAAGAGAAGCTTCGTGCGGCATGGGAACCCCAATTAGGGTTTGGGATGTTGATACCATGTCCATGCACTATCTTATTCTGAAGCGTTGGGCTTCTTTCAAGAGCTATGTTTTGATTGGGAAATGGAACAAAGAGTTTGTGAGAAGAAGGGAGTTGAAGAAGGGTGATGTTGTTGGCCTTCACCGGGATTCATATCGACAATGCTTCAACTTCTCTGTCCTTAAGCGTGCCGGTGATCGCTATTAA 564 0.4504 MLHQVTNPNIPYISLELSLISSSFQQSKATNHGGSRNLKARKEPNQRNPKKSCFSRWGCSTSLELYDNPWKIKKKLTTSDLGKLNRLLFGSDLLENLMVPLLSIEAQREASCGMGTPIRVWDVDTMSMHYLILKRWASFKSYVLIGKWNKEFVRRRELKKGDVVGLHRDSYRQCFNFSVLKRAGDRY 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01276 187 Gene3D - 67 183 IPR015300 -
Aip04g01276 187 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 25 182 - -
Aip04g01276 187 SUPERFAMILY DNA-binding pseudobarrel domain 68 178 IPR015300 -
Aip04g01276 187 CDD B3_DNA 70 181 IPR003340 GO:0003677
Aip04g01276 187 MobiDBLite consensus disorder prediction 28 53 - -
Aip04g01276 187 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 25 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01276 Aip-Chr4 21329080 21329643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01276 29 167 RAV Transcription Factor Family AT1G50680 29.655 7.34e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01276 - - adu:107483734 359.377