Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01261 ATGAGGTGGATTCAGGTGAGGGTCACCGGGATGAGCTGCGCTGCATGCTCCACCTCTATCGAATCGGCTCTCTATGCTGTTGACAGTGTAATTACCGCCTCCGTTGCTCTTCTGAACAAAGCCGATGTAGTTTTCAACCCAGCTCTAGTCAAGGTTGATTCCTCTCTTCTTCATGAAGCTAGTGTGTCCTCATATACCAATGATATATTCTTTATTACTCCGGAGATGCGGGCCTTTCCTTATGGGCGATTGGTTGAAGTGGGGATTGGGCTCCAGTATACTTTGAAACAAGTGCCATGCTCATAA 306 0.4739 MRWIQVRVTGMSCAACSTSIESALYAVDSVITASVALLNKADVVFNPALVKVDSSLLHEASVSSYTNDIFFITPEMRAFPYGRLVEVGIGLQYTLKQVPCS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01261 101 ProSiteProfiles Heavy-metal-associated domain profile. 3 60 IPR006121 GO:0046872
Aip04g01261 101 PANTHER COPPER-TRANSPORTING ATPASE RAN1 4 53 - -
Aip04g01261 101 Gene3D - 1 68 - -
Aip04g01261 101 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 4 53 - -
Aip04g01261 101 SUPERFAMILY HMA, heavy metal-associated domain 2 52 IPR036163 GO:0046872
Aip04g01261 101 Pfam Heavy-metal-associated domain 6 52 IPR006121 GO:0046872
Aip04g01261 101 ProSitePatterns Heavy-metal-associated domain. 8 38 IPR017969 GO:0046872
Aip04g01261 101 CDD HMA 5 48 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01261 Aip-Chr4 20918322 20920356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01261 1 51 Primary Pumps ATPases AT5G44790 67.308 2.77e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01261 K17686 - pop:18094634 75.8701