Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01257 ATGGCGTGGACAGGTGCAACGTGCGACAAGTGTGTGAGTGAAGGAGCAGATGTGACCTGCTGCAAGAAAGGCGTCCTCTCAATTCAGGAAATGCAACTCCCTCCACGTGATCTGGAAACATTATCAGATTGTGTAATTAGACTAAATCCAAGTGGGCAGGATGACGTGTCGGATTATGGAGATGTATTTGGTCTTACCGCAGCTGAAATAGAGAACAAGGTTTTCAGAACGGAGGAGCGTGCTTATGAATTCTATATGAGGTTTGGAAAGTGCCATGGGTTTGCAGTACGCAAGGGAGACTATGGGAAGGATGATGACGGAAATGTAATTAGGAGGAGATTCTTTTGCAACAGAGCTGGGTTAAGGGATGAAAAGCACTATAATAGATTAGATAGAAAAAGATGTCATAAGCCTGAGACACGAACGAACTGCCAGGCTAAGTTGTCGATATATCTTGACAAAGATAGTTCAAACTGGAAGGTCCGGAAAGTCATCCTCGAGCACAACCATGAGTTAGTAGCTAGGTGTATGGATTGCCGGGGGTATTCACTATTGGGTTTCACAAAGAAGGATGCTTATAACTACCTTGACCGGACTAAGCGCGCTAAGATCGCAGATGGGGACGCAAATTCTGCCATTGTCTATTTGAAGGGAAAGGCTTCTGTGGACCCCATGGCAATGGCGAGGTATAACCTGACTAAGGAGGGTATGTTGGCCaacttgttttgggccgatggaatgagcagagttgattaccaacactttagtgatgtcctcgcattcgattcgacgtacaaaaagaacaagtaCAGGAGACCGCTTGTAATATTCTCGGGTGCAAACAACCACAAACAGACGACGATCTTCGGGTTCGGGTTAGTGTTGGACGAGACGATTTCTTCGTACAAGTGGATGCTAGAAAATCTCCTTGAGGTGATGTGTAATAAATTGCCATCTGTTGTAGTCACAGACGGCGATGATGCCATTATTGCCACAGTTACGGAAGTTTTTCCTAGTGCTACCCATCGCCTATGTGCTTGGCATCTACAAAAGAATGTTACATCTAATGGGAACGAGCAGATGTTCAGGGACTTGGCATCTACAAATGACTGA 1113 0.4178 MAWTGATCDKCVSEGADVTCCKKGVLSIQEMQLPPRDLETLSDCVIRLNPSGQDDVSDYGDVFGLTAAEIENKVFRTEERAYEFYMRFGKCHGFAVRKGDYGKDDDGNVIRRRFFCNRAGLRDEKHYNRLDRKRCHKPETRTNCQAKLSIYLDKDSSNWKVRKVILEHNHELVARCMDCRGYSLLGFTKKDAYNYLDRTKRAKIADGDANSAIVYLKGKASVDPMAMARYNLTKEGMLANLFWADGMSRVDYQHFSDVLAFDSTYKKNKYRRPLVIFSGANNHKQTTIFGFGLVLDETISSYKWMLENLLEVMCNKLPSVVVTDGDDAIIATVTEVFPSATHRLCAWHLQKNVTSNGNEQMFRDLASTND 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01257 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 70 175 IPR031052 GO:0006355
Aip04g01257 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 188 365 IPR031052 GO:0006355
Aip04g01257 370 Pfam MULE transposase domain 258 352 IPR018289 -
Aip04g01257 370 Pfam FAR1 DNA-binding domain 83 173 IPR004330 -
Aip04g01257 370 PANTHER OS02G0262500 PROTEIN 70 175 - -
Aip04g01257 370 PANTHER OS02G0262500 PROTEIN 188 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01257 Aip-Chr4 20850417 20852937 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g01257 MULE 7.7e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01257 - - aip:107636226 688.723