Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01251 ATGGGAAAACATTTGAGGTACGAAGAGAATGCAGGGTTTCAGAAGTTCAAAGGCATTGTTCCTCAGCAAAACAGCCATTGGGGAGTACAAATATATGAAAACCACAAGAGAATATGGTTGGGAATATTCAAGATGGAAAGAGAAGCCGCCATGGCTTACAGCAGCGCCACCATCAAGCTAAGAAGCGGCGATGATCATAATGGGTCTgcacggggttgttgcagagtgatctga 234 0.3889 MGKHLRYEENAGFQKFKGIVPQQNSHWGVQIYENHKRIWLGIFKMEREAAMAYSSATIKLRSGDDHNGSARGCCRVI 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01251 77 ProSiteProfiles AP2/ERF domain profile. 15 70 IPR001471 GO:0003700|GO:0006355
Aip04g01251 77 Gene3D AP2/ERF domain 14 68 IPR036955 GO:0003700|GO:0006355
Aip04g01251 77 SUPERFAMILY DNA-binding domain 15 63 IPR016177 GO:0003677
Aip04g01251 77 SMART rav1_2 15 72 IPR001471 GO:0003700|GO:0006355
Aip04g01251 77 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 3 67 IPR044800 GO:0003700
Aip04g01251 77 PANTHER DNA-BINDING PROTEIN RAV1 3 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01251 Aip-Chr4 20680406 20680639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01251 15 64 RAV Transcription Factor Family AT1G51120 70.000 6.29e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01251 K09287 - cit:102629823 100.908