Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01243 ATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGACTTGCCAATTTTATAACGCTTATGCTTGTTGGCATGGATTTGTAATGAGGAAGGATGACATCGTTAGAGATAACGAAGGTAGAATCATTTGCAGGCAACTTGTTTGCAATAAGGAGGGCTGGAGGAATATGAGGTATCTTGATCTGGATGATAGATTAAGGGAGGCAAGGTCACTCACGCGAACCAAGTGTTCAGCTCGGCTTAGGGTAAAGCATGACTACGGCTGCGGAAGATGGAAGGTATCATATTTTGTGGAATCTCACAACCACGATATGACCGCCCCACCCCAATTTGTGTATCTCGTTTCGGCCAATCATCGTCTCACTGTTATTGATAAAGTCCAAGTGAAAAATCTTCATAATTTTGGTGTCAAGACGTGCTATATTATAGGATATATTGCGTTCCAGAAGGGTGGATATCATCATGCTAGCTTCACACGCAAAGATTTGTACAACCACATTGATTGTTATCGTAGATCAAAAGTAAAAAATGGGGATGCCAATGCGGCGATAAATTATTTGATTAGCAAGTTAAACAACGATCCACTGTTCTTTGGGAAGTATACGTTCACTAGTGACGAAGGGCTCGAGCATATTTTTTGGGCAGATGGGCAATCAATTGTTGAATATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAATGTACAAGAAGAATAAATACAACAAACCTTTGGTCATTTTCTCCGGATGCAATCATCATGGGCAGATTGTTATCTTCGACTCCGGCCTACTATCTGACGAAACCACAGACACGTATAAGTGGTTGTTGGAAACGTTTGTTGAATCGATGGGTGGAAAAAGTCCTAAAGCATTAATAACTGATGGAGACCTTGCCATGCGAGATGCAATCAAGAATATTCTTCCTAATGCGACCCATTGGTTATGCGGATGGCATCTTTAG 969 0.4138 MVEDIWNLEFRTEDETCQFYNAYACWHGFVMRKDDIVRDNEGRIICRQLVCNKEGWRNMRYLDLDDRLREARSLTRTKCSARLRVKHDYGCGRWKVSYFVESHNHDMTAPPQFVYLVSANHRLTVIDKVQVKNLHNFGVKTCYIIGYIAFQKGGYHHASFTRKDLYNHIDCYRRSKVKNGDANAAINYLISKLNNDPLFFGKYTFTSDEGLEHIFWADGQSIVEYHCFGDIVAFDSMYKKNKYNKPLVIFSGCNHHGQIVIFDSGLLSDETTDTYKWLLETFVESMGGKSPKALITDGDLAMRDAIKNILPNATHWLCGWHL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01243 322 PANTHER OS02G0262500 PROTEIN 4 322 - -
Aip04g01243 322 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 322 IPR031052 GO:0006355
Aip04g01243 322 Pfam MULE transposase domain 231 322 IPR018289 -
Aip04g01243 322 Pfam FAR1 DNA-binding domain 18 107 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01243 Aip-Chr4 20530974 20531942 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g01243 MULE 1.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01243 - - aip:107614789 603.979