Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01215 ATGGAGGTAGTTCCATCCAACTTGATCACATCTCAGGGATTCAAGAGCCGCGTTAAGTTCTTTAGTATTCTTGATCCAACAAGACCCTGTAATAATGTTTCTGAAATCTCTGATGCTGGATTTCTTGGTCCTCTTTTCAAGGTTACCATGGAAGAACATCCAACTGAAGCTCTCACAAACACATCATCGGATAAGTGTTGGGAAACAATTCTTGACAGACTAAATGCTGAGATCGAGAGGTGTAAGAGTCTAGGTGAACAAGAACTCCCTCCCTTGGAGGTTTTGCAAAGCATTAATGGTCATAAAATGTTCGGATTCCTTAAGCCATCCATTATTCAGGCCATTGAAGCTCAAGATCCCAGTCATCAATGTGTAGAGTACTGGCATCACAAAGAACTTTCCTCTGAATCTTCAGGCAGTGGAAATGATGCCTCTAAGTGCTCAAATGGTTCAAGCAACTCTCTGGGTGATGTCAAGACCAAACTTTTCGGCTTCAATTTGATAAAGCAGGAGCAAGAAGATAACATAGAAGGACATTTTCATTCATTTGAAGAGATGAAGTCATTGCTACAAGGATTCCTAAAAAAGGCCAGTCCTGCCGAGTTGAGTGCAATGCTCAAGTTATTTAGCTCTGATTCACAAGTTACTCAATGGAGAGCGGCATTCGTAGTGTTGATCGAAGAGATCCAGAAAGGTTGTAGATAA 705 0.4128 MEVVPSNLITSQGFKSRVKFFSILDPTRPCNNVSEISDAGFLGPLFKVTMEEHPTEALTNTSSDKCWETILDRLNAEIERCKSLGEQELPPLEVLQSINGHKMFGFLKPSIIQAIEAQDPSHQCVEYWHHKELSSESSGSGNDASKCSNGSSNSLGDVKTKLFGFNLIKQEQEDNIEGHFHSFEEMKSLLQGFLKKASPAELSAMLKLFSSDSQVTQWRAAFVVLIEEIQKGCR 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01215 234 Pfam F/Y rich C-terminus 43 129 IPR003889 GO:0005634
Aip04g01215 234 SMART fyrc_3 45 139 IPR003889 GO:0005634
Aip04g01215 234 Gene3D - 3 125 - -
Aip04g01215 234 ProSiteProfiles FYR domain FYRC motif profile. 41 131 IPR003889 GO:0005634
Aip04g01215 234 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 8 232 - -
Aip04g01215 234 PANTHER LYSINE-SPECIFIC DEMETHYLASE 8 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01215 Aip-Chr4 19601117 19602600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01215 9 230 JUMONJI Transcription Factor Family AT4G20400 38.222 5.68e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01215 - - adu:107473965 358.992