Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01179 ATGATAAATAATCATTGCCATTTCTACAATTTGAGGGGTACCATTCTTGGGGATATGATGGGAGATACTTGGTTAGGAGCACATGAACAATACAAGGACTATTATGCAGCACTTTATTTGAGGAATAGCTGCGGAAAGCTTCTATCAATTATTGTTCAAAAAGACTTACTTTCATCCTCATTGAGTAGCCAAGATTTGGGAAAGAGATTGCATGCTTTCAATGTAGCTTTTGATGAGAGGTACAAGAAGGAATCTAGTTGGACAATTTGTGTTGAGGCCTTGAGGAAAAATATATGCAAGCATTTGGTGGAATGTATTGTACCAATCTATAAGGCCTATGTGAAGAATTACAACTTGTCAATCGAGAATGAAGGTATGGTTGTGAAGCATATCAAATATACAGCAGAGAGTTTGGAGAATAAGATTTGGTCTCTGTTTCAGCCAAAGCTGAAGAAGAATGGGAGTGTCAAGCATGCAGATTGGACTAGCAAAATAAAACAAGTTAGCAAAAATTTTCGCTTCACTCTAGCTGCTAAGTTGTTAATGAGAGAAGGGAAAAGTGGGATTCAAGAAGAAGAAAGGGGTGCCTTCACGAGGGTCAACAGCGAACCTGACGCCAATGGCCAAAGGGGAAGAAGAACCCTCATGACCCTCATTGGTCAAAGCAGAGAGAGTTCCCACAGTGGCAAGCTCCATGATGGTTCTAGAAACCTCTGCGGGGAAGGGCTTCTTGTTGCTGTGAGTGCTCAATTCGAAATGGGGTGCTTCTGA 771 0.4125 MINNHCHFYNLRGTILGDMMGDTWLGAHEQYKDYYAALYLRNSCGKLLSIIVQKDLLSSSLSSQDLGKRLHAFNVAFDERYKKESSWTICVEALRKNICKHLVECIVPIYKAYVKNYNLSIENEGMVVKHIKYTAESLENKIWSLFQPKLKKNGSVKHADWTSKIKQVSKNFRFTLAAKLLMREGKSGIQEEERGAFTRVNSEPDANGQRGRRTLMTLIGQSRESSHSGKLHDGSRNLCGEGLLVAVSAQFEMGCF 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01179 256 Gene3D Exocyst complex component Exo70 1 155 - -
Aip04g01179 256 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 170 - -
Aip04g01179 256 SUPERFAMILY Cullin repeat-like 1 146 IPR016159 -
Aip04g01179 256 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 170 IPR004140 GO:0000145|GO:0006887
Aip04g01179 256 Pfam Exo70 exocyst complex subunit 1 142 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01179 Aip-Chr4 18827289 18828284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01179 2 166 EXO70 exocyst subunit family AT4G31540 43.529 2.07e-41 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01179 K07195 - ahf:112768061 345.125