Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01178 ATGGAAGGAAAGCAGAACCTTGATGCTGCAAGAAAGTGCTTGCTAGCTAGCTTGGAAACATCAAGTGCCATTGGTTCTGCATTAGATGAATCTGAATCAAGATTGGAGCTTCTTCGCCAGCGATGTCAATCCCTGCAAACTTCATTCAGACCAATCTCCATGCAGAAATGCTCGTTCATGGACGTTGGCAATGATGCCAAGAAGCTTGAAGAAGCCTTGAAGCTTCTCACTGATAATTGCACGTTAGCAATTGGCTGGTTGCAGGGTGTTCTTGACTTCTTACAAGACAAAGTGATCACCAATGAGTTTTACCTCTTTCAGGTGAAGAAATCCTTGAGGATACTGCGAGAATTGCAAGCCGTGGAAGAGGGAGTTTGCATCAATGGAGGTTTTCTCAGTGCAGCCTTAGACAATCTAGAGACTGAGTTCCAAAGACTTCTGATGGCAAACTCAATGCCCATTCCTTTGGTTTCGTTAGGATCACACGTCGCAACACAAGCTTTGCCAGGTTCTGTTATGGGGAAGTTGCAGGCCATCATTGAGCGGTTAAATGCAAACAGCAGGCTAGCCAAGTGTAAGTCTATATATGATGAAGTTCGAGGGACGAATGCTCAAAGAACTTTGAACACTTTAGACTTGAGCTACCTTGAGATTCCAACAGCTAAATTTGAGGATGTCAGGGAAATAGCGAGTTACATAGACCAATGGGGCATTGATTTGGAGTTGGTTGTCAAGAACGTTCTTCATACTGAGTACATGCTATCTTGCCGTGTCTTTGAGAAGATTGGTCGAGAAGCATCGACCGAATGTTTTGCCAGGATCGCCATCAGATCAGGAATTCTTTCATTCATTCTATGTTTCATTCCATCGACCGGCGCAAGTGAAGCTGCAAAGGCCAAGTTCTCCTCCCCGAGATAG 918 0.4466 MEGKQNLDAARKCLLASLETSSAIGSALDESESRLELLRQRCQSLQTSFRPISMQKCSFMDVGNDAKKLEEALKLLTDNCTLAIGWLQGVLDFLQDKVITNEFYLFQVKKSLRILRELQAVEEGVCINGGFLSAALDNLETEFQRLLMANSMPIPLVSLGSHVATQALPGSVMGKLQAIIERLNANSRLAKCKSIYDEVRGTNAQRTLNTLDLSYLEIPTAKFEDVREIASYIDQWGIDLELVVKNVLHTEYMLSCRVFEKIGREASTECFARIAIRSGILSFILCFIPSTGASEAAKAKFSSPR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01178 305 Coils Coil 28 48 - -
Aip04g01178 305 PANTHER EXOCYST COMPLEX PROTEIN EXO70 66 284 IPR004140 GO:0000145|GO:0006887
Aip04g01178 305 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 63 IPR004140 GO:0000145|GO:0006887
Aip04g01178 305 Gene3D Exocyst complex component Exo70 96 288 - -
Aip04g01178 305 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 3 63 - -
Aip04g01178 305 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 66 284 - -
Aip04g01178 305 SUPERFAMILY Cullin repeat-like 69 276 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01178 Aip-Chr4 18826025 18827059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01178 3 284 EXO70 exocyst subunit family AT4G31540 40.120 3.33e-66 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01178 - K07195 aip:107636194 575.089