Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01155 ATGCTTGGTCCTGAAACAGAACTTAAGATAAGTTTTGGCTACCAATGCAATGGCATTGAAGATATCTCCTGCAAGTCTATCAACGGCTACAAAATCCTTCCATATTTCCCTAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCTGTTAGCGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTGATAGGGGAAGAAATCCTTCCTAGTTTGGACTCTCCTAAATCGTTTCGTAAGATACCCTCTTCGCCAAGTCTTTCGAAGTTGGACATACTATCATCTTCTCTCCATAGTAGTTTCTCAAACCTCAGTTGCAGTCCATCCACACAAAGTGATATGTTTGATTATGACGCTTGTATGGTGAGTGCTCCTTGCAAAAGTGAAGGATTTCTCAATGCTATGGAAGTACAAGTAGCAGGGGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGCTGGCTCTTTTGTGGAATTTATGACGGCTTTAACGGCAGGGATGCAGCTGACTTTCTGGCCTGTACCCTTTACGACACTATCATATCTTATTTTAATATGCTGTATTTTGATTTGGAATCAGATTCTATCAAGGCTTCCAACAGTCTTGATTTGGGTGGATCATCTCAATATGAGTTGGATGAGCGTCAATCTCGTTCTCAGAAATCATTTTCATATGCTGTTCTTGATAGCCTCCAACGTGCTCTCAATCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGACCGTCCGGATTTAGTTTCTGTCGGATCTTGTGTTTTACTTGCACTTCTTCATGGGGAAAATTTGTATACACTTAATCTTGGTGACAGCAGAGCAGTATTGGCAACGTGCAGTATGGATGGCGGAATGAGTGGCAAAGAGAGAAGAATGAAAGCTATCCAGCTTACTGATATTCATACTGTTGACAATGAAGCCGAAAGAGCTCAACTTCTTGCTGGTCACCCAGATGATCCCAAGGCCATTGTAGCTGGGAAAGTGAAAGGAAAATTGAAGGTTACTCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTGATGGGAATTCTTCGAGTGCGTGATCTCATAAGCCCACCATACATTTCCATTCAACCGTCACTAAACGTGCATAGAATCTCAAGTTCCGATCAATTTGCTATAGTTGCGAGTGATGGTTTGTTCGATTTCTTCAGCAATGATGAAGCAGTAGAGCTTGCAGAGTCTTACATCCTAAGCAATCCATTTGGTGATCCAGCAAAATTCCTTGTTGAGCAACTTATAGCAAGAGCTGCTGATTCTGCAGGTTTTAGCACGGAAGAGTTGATGAATGTTCCGGCCGGGAGGAGGAGGAAGTACCATGATGATGTGACCGTGATTGTCATCATCCTTGGGATGAATCAACGGACGTCAAAGGCATCAACATGCATCTAA 1476 0.4255 MLGPETELKISFGYQCNGIEDISCKSINGYKILPYFPRTSSFSCLSGAAVSANATLANTNICNGVIGEEILPSLDSPKSFRKIPSSPSLSKLDILSSSLHSSFSNLSCSPSTQSDMFDYDACMVSAPCKSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLACTLYDTIISYFNMLYFDLESDSIKASNSLDLGGSSQYELDERQSRSQKSFSYAVLDSLQRALNQVENDFLYMVEQEMEDRPDLVSVGSCVLLALLHGENLYTLNLGDSRAVLATCSMDGGMSGKERRMKAIQLTDIHTVDNEAERAQLLAGHPDDPKAIVAGKVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLISPPYISIQPSLNVHRISSSDQFAIVASDGLFDFFSNDEAVELAESYILSNPFGDPAKFLVEQLIARAADSAGFSTEELMNVPAGRRRKYHDDVTVIVIILGMNQRTSKASTCI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01155 491 SMART PP2C_4 124 476 IPR001932 -
Aip04g01155 491 Pfam Protein phosphatase 2C 226 432 IPR001932 -
Aip04g01155 491 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 208 - -
Aip04g01155 491 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 213 490 - -
Aip04g01155 491 Gene3D - 114 487 IPR036457 -
Aip04g01155 491 ProSiteProfiles PPM-type phosphatase domain profile. 133 478 IPR001932 -
Aip04g01155 491 CDD PP2Cc 146 478 IPR001932 -
Aip04g01155 491 PANTHER PROTEIN PHOSPHATASE 2C 213 490 IPR015655 GO:0004722|GO:0006470
Aip04g01155 491 PANTHER PROTEIN PHOSPHATASE 2C 2 208 IPR015655 GO:0004722|GO:0006470
Aip04g01155 491 SUPERFAMILY PP2C-like 147 479 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01155 Aip-Chr4 17898451 17900242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01155 4 491 PP2C-type Phosphatase Gene Family AT3G16560 63.690 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01155 - - gmx:100791404 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01155 04 17898451 17900242 Aip04g01155 04 17898451 17900242 ECH
Aip01g02809 01 129758588 129759933 Aip04g01155 04 17898451 17900242 PCT