Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01150 ATGGACCCTAGTGGATCGTACGCGGTCTCAGGAGGAGGAGCAACCCAAATGAAAATGACGATTCGGCCCTCCCACTCGCACCACCACTCTGAGAGCAGCAACAGCGACCGCGCACTCGACTGCAACCTCACCTCCCTCTGCGATCACATCCAATCCGAAGGCTTCAACTCCGGCGCCTTCTCCGACATCCTCCTCCACGCCCTCGGCTCCACCTTCCGCCTCCACCGCCTCCTCCTCTCCCGAAGCTCCTATTTTCGGAACATGCTTCATGGACCTTGGAAGGAAGCATCTGCACCGGTTGTGACTTTGCACGTGGACGATAAAAACGTTAACGAAGAGGCCATTACTATGGCATTGGCTTATCTCTATGGCCACCACCCTAAGCTTAACGACAACAATGCTTTCCGTGTTCTCGCTGCTGCTTCCTTCCTAGACCTTCAGGATTTGTGTGCAATATGTACGGACTTCATTATATCAGAGCTTTGGACTTCTAATTTCTTGGCTTACCAGGTGTTTGCCGAGAACCAGGACTATGGCATCCATGGGGAGCGTGTAAGAAATGCTTGTTGGGGCTACCTTTGTCAAAGTGGTGGCATGGAATTAAAAGAGGTGCTTCCTAAACTTTCATCTCAAACATTGCATGCATTACTGACCAGTGATGAACTATGGATACCAAGTGAAGAGAAGAGGTTTGAGTTGGCTTTGTATGTGTTCCTCGCAAAGAGTGCTCAGTGGAAGGCCAAACATCCTGAACATGGAAGTTCCAGTTCTGAGTCTGGAACTGATATCCATTCTGATTCTGATCACTCTAAGGGGAAGAGTGTATCTGACGGCTGCACTGATAAGAGGTTGGAAACTGATCTAGAGCAAATGAGTCTTAAAAGTGGTCTAAAGGATCCTAATGCCCGTAATCTTCTAGTTGAGCTTCCAGACTTCAACAATGCAGCTTCTAACTCCAATCAACAAAGTGAAGAAGCTTCATATACCAGCTCATCAAACCTGAAACCAACATACTCTTGCAACATGGAAGGGCCTTCATCAATGGGTGATTCATTATCTGATACAGATGGCATCAGAACATCATGTTCCTATGTTGAGATGCCTGTTGTTGCTGGAGCAAATGGAGTGGCTATGGAAGGGCCATCTGAGGAAGGATCTTGCTTCCATTTGGATAACAATAGTTGGATTGTTAGGGATCAATCTAGAAACCGTTTTTCATCAAATTCTTCTTCTAGCGGGGTCTCATCCAATGATTGGGGAAGATATGGAGCACCATTTTTTTCATGGGGTGGAAGAGTTGTTGGCAAAAGACGTCTTGAAGCTCACTCCAAAAGAAACTATGCAGATCATGGGGATGAATATGATGCATTTCTTAACATATTTGAAGGGGGCTCTCTCTTATACTGCAACATGTCTTTTGAGGCTCTTTTGAATGTCAGAAAGCAACTTGAAGAGTTAGGTTTCCCTTGCAAAGCTGTGAATGATGGTCTTTGGCTTCAGATGCTTCTTAGTCAGAGGGTGCAAGAAATTGCTGCTGATACCTGCAAAAGTTGCTCCCTTATGAGTATGGCTTGTACCTGCCGGCAACCATTTACATTTTCACATGGAGCTAATTCCACTGGATTTTACATTCAAGAACATAACCAGAATAATATGCATGCGAACATGGGCAATATATATGTTGCCGAGCCTTCTCCAGGTGAAGGAAATGGCATCTTTAGACCTGTACGAGTACATGTTAGAGGGGCTATAGATGGGCTTGCAGGTATTGGTCGTGGAACTACATTTGTTCCAGCAGCTGCTTCTGCTCCTACACGATTTGTCTTTTCTCGTGTACCATTTGGTGTTGGGAACAGAAACTACCAGCAATCTGCAGCCAATGATGATTCAGAGATGCGAACTGATCACAACGGCGACCTGTCTGGAGATGGATTGACAGCTTTGGTTGGATTAAGTCAAGGTGGGGTTAATGGAATAAATGTACATGGAGAACTTTCTCAAAGGGGATATGAAATGGACATGCAAGGCAGAATGTCTGGAACTGCAGGAGGCCCAAGTACTGGTGGTATTCCTATGCAGATGTTAGAGACACCAGAACATAACGGTGGAATAGAATGGGAGAATTCAAATAATTCATCTATATCATTGGATTTGAAAACGCCTTTAAGCCATTTCCCCCCTTTTCGCTTTGGGGTCCAATTTGAGGATGTGCACAGACTCGGTGATGGTCAGGTTAAGCATTCTCCAGAAATGTTCTATGCTGGTTCTTTATGGAAGGTCAGTGTACAGGCTTTTAATGATGAGGACCCCCAGGGAAGGCGTACACTGGGGTTGTTTCTTCATCGTAGGAAGGCAGAGATAACTGATATACATAGAAAGGTGCACATGTATGTTGACTCTCGTGAAAAGGTGACTGCTCGCTACCAGTTGATTTGTCCATCCAAGAGGGAGGTAATGGTGTTTGGAAGCTTTAAACAAACAGGCACTCTTCTACCTAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTATTATTTGATGAGCTTGCTGATCTTCTCCAAAATGGAGCCCTAAGGGTCATTGCTGTGGTGCAGCTTGTTTGA 2604 0.4547 MDPSGSYAVSGGGATQMKMTIRPSHSHHHSESSNSDRALDCNLTSLCDHIQSEGFNSGAFSDILLHALGSTFRLHRLLLSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNEEAITMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTLHALLTSDELWIPSEEKRFELALYVFLAKSAQWKAKHPEHGSSSSESGTDIHSDSDHSKGKSVSDGCTDKRLETDLEQMSLKSGLKDPNARNLLVELPDFNNAASNSNQQSEEASYTSSSNLKPTYSCNMEGPSSMGDSLSDTDGIRTSCSYVEMPVVAGANGVAMEGPSEEGSCFHLDNNSWIVRDQSRNRFSSNSSSSGVSSNDWGRYGAPFFSWGGRVVGKRRLEAHSKRNYADHGDEYDAFLNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKSCSLMSMACTCRQPFTFSHGANSTGFYIQEHNQNNMHANMGNIYVAEPSPGEGNGIFRPVRVHVRGAIDGLAGIGRGTTFVPAAASAPTRFVFSRVPFGVGNRNYQQSAANDDSEMRTDHNGDLSGDGLTALVGLSQGGVNGINVHGELSQRGYEMDMQGRMSGTAGGPSTGGIPMQMLETPEHNGGIEWENSNNSSISLDLKTPLSHFPPFRFGVQFEDVHRLGDGQVKHSPEMFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDIHRKVHMYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01150 867 Pfam BTB/POZ domain 55 159 IPR000210 GO:0005515
Aip04g01150 867 MobiDBLite consensus disorder prediction 249 280 - -
Aip04g01150 867 MobiDBLite consensus disorder prediction 262 280 - -
Aip04g01150 867 SMART BTB_4 61 161 IPR000210 GO:0005515
Aip04g01150 867 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 13 867 - -
Aip04g01150 867 MobiDBLite consensus disorder prediction 314 354 - -
Aip04g01150 867 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 13 867 - -
Aip04g01150 867 SUPERFAMILY POZ domain 53 159 IPR011333 -
Aip04g01150 867 Gene3D Potassium Channel Kv1.1; Chain A 29 194 IPR011333 -
Aip04g01150 867 ProSiteProfiles BTB domain profile. 61 131 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aip04g01150 BTB 1.1e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01150 - - adu:107483601 1711.04