Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01149 ATGTCTTCTAGTTCTTCTTCTTGGCTTACTTCATCTTCTTGTTCACCTCTATCAGTGGATTCATCTTCTCCTACTTCACAACTTGTAGCTCAATGGTTGAGGTTCATATTCCTATCACCATGTCCTCAGAGACTTCTTCTTTCTGCCATTGATCTCATCTTCTTGATCACCCTCTTAGCCTTTGCAGCTCAAAAGATCTATTCTAGATTCAGTTCTAATGCCAACTCTGGCTCCACAATAACCAAGCCTCTTTTGCAGGACAAAGATTCAGATTACAAGGTTACCTTGTGGTTCAAACTACCCCTTTTGGTGACATCACTCTTGGCTCTGACTTACACTGTTCTAAGCATCTTGGCCTTCACTCAAAGCAATCTTGCCTCATGGAGACAGATAGAGGCCCTCTTTCGCCTCGCGCAAGCGATAACCAACATAGTGATAGTGATTCTGATGGTACATGAGAAGAAGTTCAAAGCTCCAAAGCACCCTTTGTCACTAAGATTCTATTGGATTGCAAACTTTGTTGCTGCTTTCCTTTTTGCCACTTCGGCCATTATTCGATTAGTAAGTGTTGAGGAATCGAGTTTGGAGGCTAATTTGAGAGTGGATGATGTGTTTTCTTTCATCAATCTTGCAGTTTCTTTGTTCCTTTTGGTAATAGCAATCAAAGGGTCATCAGGGATTGATGCTATAAGAATTTCTGATGTGATTGAAAGTTCAAGAACATGGCTTTCCAATGACAGGACTACGAGTCTTTATGGCAATGCTTCTTTGTTCTCCAAAACAGTGTGGCTTTGGATGAATCCTTTGCTCAACAAAGGGTACACAACACCACTCAAACTCCAAGATGTTCCAACGCTTCCTCTCGAGTTTCGGGCTGAAAGGATGTCAGAGCTTTTCCAAGAATATTGGCCAAAGCCAGAGGAAAACTCCAAGCACCCTGTTGGATTCACCCTGCTAAGATGCTTCTGGAAACACATAGCATTCACCGGCTTCCTCGCAGTTGTTCGGCTCGCTGTTATGTACATCGGTCCAATGCTTATTCAGAGCTTTGTAGATTTCACATCAAAGGCTAATCCTTCTCCCTATGAAGGACTTGTCCTGATTTCGATCCTGCTTGTGGCAAAATCAATTGAAGTCCTCAGTGTTCATCAATTCAACTTCCACTCTCAGAAACTCGGCATGCTTATTCGTTCCAGCATCATTACTTCAGTTTACAAGAAGGGTCTAAGATTATCTAGCACTGCAAGGCAGGCTCATGGAACTGGCCAGATTGTGAATCATATGGCTGTTGATGCTCAACAGCTATCTGATTTGATGCTTCAGCTTCATCCTATTTGGTTAATGCCATTGCAAGTTGCAGCGGCGTTGGCCTTAATTTACACCTATGTTGGCTTGTCTGCAGTTGCAGCCCTGCTTGGAACTGCTGTGGTATTTGTTTTCACTCTGATTCGGACCAAGAAAAGCAACAGTTTCCAGTTCAGGATCATGATGAGCCGTGACTTGAGGATGAAGGCAATTAATGAGCTTCTCAACAACATGCGTGTCATCAAGTTTCAAGCATGGGAGGATTACTTCGGCAACAAGATTCGCCAATTTCGCCAAGCTGAGCACGGTTGGATTGGCAAGTTCTTGTATTATTTTGCTGTCAACATGGCAATTCTCTCCACTGCTCCTCTCTTGGTCACGGTTCTTACCTTTGGAACCGCCACGTTTCTTGGGATTCCTCTTAATGCTGGAACTGTTTTCACCATAACTTCTGTGATCAAGATTCTGCAGGAGCCGGTTAGGACTTTCCCTCAGGCTCTTATGTTGATTTCTCAGGCTATGGTTTCTCTAGGGAGGTTGGATGAGTTCATGATGAGTAAGGAAAGGGATGAGAATGCAGTGCAAAGAGATGATAAATGCGAAAGCGACATAGCCGTGGAGATGAAAGATGCGAAATTCTCTTGGGATGATGAGGAAGGGAATGAGGCTCTGAAGGTTGAAGAGCTGGAGATTAGGAGAGGGGACCATGCTGCAGTTGTTGGAACTGTTGGCTCAGGAAAATCTTCGTTGTTGGCTTCTGTGTTGGGGGAAATGTACAAAATTTCAGGAAAGGTCAGAGTTTGTGGGACAGTTGCATATGTAGCACAAACATCATGGATTCAGAATGCAACCATCCAGGAAAACATATTGTTTGGACTACCAATGAACCAGAAGAAATACAAAGAAGTCATAAGAGTGTGCTGCCTGGACAAGGATCTAGAAATGATGGAGCATGGAGACCAGACTGAGATAGGAGAAAGGGGTATTAACCTCAGCGGCGGCCAGAAGCAACGAGTGCAACTCGCCAGAGCTGTGTACCAAGATTGTGACATCTATCTCCTTGATGATATATTCAGTGCTGTTGATGCCCAAACAGGATCATTCATTTTCAAGGAATGTGTTATGGGAGCTCTTAGACATAAGACCATTTTACTAGTAACTCACCAAGTTGATTTCCTGCATAATGTTGACTCTATAATGGTGATGCGAGACGGGAGAATTGTGCAAAGTGGAAAGTATGATGAACTTCTCAAAGCTGGCCTGGATTTTGGTGCACTTGTGGCTGCTCATGAAAGTGCTATGGAGATTACAGAAACTGGTGATGGGTTTAGCCAGTCTCCAAAGTTGGCTCGCATTCCTTCGAAGGAAAAGGAAAGCGCAGGCGAAAAGCAATCTCAAGAGCAATCTAAGTCTGATAAGGGTTCATCAAAGCTCATTGAAGAGGAGGAGAGGGAAACTGGCCAAGTCAATCTCCGAGTATACAAACATTATTTCACTGAAGCATTTGGATGGTGGGGAGTAGCACTCATGCTGGCAATGTCTTTAGCATGGATCATAGCCTTCTTGGCTGGTGACTACTGGCTAGCATTTGCAACTTCAGAAGCTTATACTGTTCCTTCTTTCATTTTCATTATTGTGTATGCTGCCATAGCAGCAGTTTCATGCATAGTAGTGATGATCAGGTCATTCTTATTTACATATTGGGGTCTAAAGACATCTCAAAGCTTCTTCATTGGTATGCTTGATAGCATTCTGCATGCACCAATGTCATTCTTTGACACCACTCCTTCTGGCAGAATCTTAAGTCGTGTATCTACTGATCTACTTTGGGTTGATATATCAATTCCATTGTTAGTAAGCTTTGTGATGGTGTCATACTTCTCATTAATCAGCATCATCATTGTCACATGCCAAAATGCTTGGGAGACTGTCTTCCTCTTAATTCCATTGTTTTGGCTGAATAATTGGTACCGGAAATATTACATTGCATCTTCTCGGGAACTGACTCGCCTTGATTCTATCACGAAAGCTCCGGTTATCCATCACTTCTCAGAGACCATTTCCGGTGTTATGACGATCCGGGGCTTCAGGAAACAGGGAGCATTCTGTCAAGAAAATCTTGACAGGGTAAATGCAAGTCTCAGAATGGATTTCCACAACAATGGAGCAAACGAATGGCTCGGTTTTCGCTTGGACTTTACAGGAGTGGTTTTCCTTTGCATTGCCACTGTTTTCATGATCTTTCTGCCAAGTGCTATTATTAGGCCAGAATATGTTGGTTTATCTCTATCCTATGGCTTGGCTCTCAGTAGTCTCTTATCATTCACCATAAGCATGACTTGTTCTGTTGAGAATAAAATGGTTTCAGTTGAGAGGATAAAGCAGTTTACCAACCTTCCATCAGAAGCTCCATGGACAATCCCTGAGAGGACTCCTCCTCAGGATTGGCCTAGTCATGGCAACATTGAGTTAGATAACTTGCAGGTTAGGTATAGGTCAAATACTCCTCTAGTTCTCAAGGGAGTATCACTCACTATTCAAGGAGGAGAGAAGATTGGTGTTGTTGGCCGTACAGGGAGTGGGAAATCAACCCTCATCCAGGTGCTATTTAGGCTGATTGAGCCTTCAGCTGGAAAAATAATCATTGATGGAATCAACATTTGCAATGTGGGGCTTCATGATCTGAGGTCTAGATTCGGAATCATTCCCCAAGAGCCAGTTCTCTTTCAAGGAACTGTAAGAAGCAACATTGATCCCCTTGGATTGTATTCAGATGAAGAAATTTGGAAGAGTCTCGAGCGCTGCCAATTGAAAGATGCAGTGACTGCAAAGCCTGAAAAACTTGAGGCTTCAGTGGTTGATGGAGGAGACAATTGGAGTGTGGGGCAAAGGCAGTTACTTTGCTTGGGAAGGATCATGCTCAAACACAGCAGGATACTATTCATGGATGAGGCAACGGCATCTGTTGATTCACAAACTGATGCTGTGATACAGAAGATCATCCGTGAGGACTTCGCGGATCGAACAATTATCAGTATTGCTCACAGAATACCAACAGTCATGGATTGTGACAGGGTTTTGGTCATAGATGCAGGTTATGCAAAGGAATTTGACAAACCATCACGTTTGCTAGAAAGGCCAACAGTTTTTGGAGCATTGGTAAAGGAATATTCCAATAGAGCTTCAGAAGTATAA 4500 0.432 MSSSSSSWLTSSSCSPLSVDSSSPTSQLVAQWLRFIFLSPCPQRLLLSAIDLIFLITLLAFAAQKIYSRFSSNANSGSTITKPLLQDKDSDYKVTLWFKLPLLVTSLLALTYTVLSILAFTQSNLASWRQIEALFRLAQAITNIVIVILMVHEKKFKAPKHPLSLRFYWIANFVAAFLFATSAIIRLVSVEESSLEANLRVDDVFSFINLAVSLFLLVIAIKGSSGIDAIRISDVIESSRTWLSNDRTTSLYGNASLFSKTVWLWMNPLLNKGYTTPLKLQDVPTLPLEFRAERMSELFQEYWPKPEENSKHPVGFTLLRCFWKHIAFTGFLAVVRLAVMYIGPMLIQSFVDFTSKANPSPYEGLVLISILLVAKSIEVLSVHQFNFHSQKLGMLIRSSIITSVYKKGLRLSSTARQAHGTGQIVNHMAVDAQQLSDLMLQLHPIWLMPLQVAAALALIYTYVGLSAVAALLGTAVVFVFTLIRTKKSNSFQFRIMMSRDLRMKAINELLNNMRVIKFQAWEDYFGNKIRQFRQAEHGWIGKFLYYFAVNMAILSTAPLLVTVLTFGTATFLGIPLNAGTVFTITSVIKILQEPVRTFPQALMLISQAMVSLGRLDEFMMSKERDENAVQRDDKCESDIAVEMKDAKFSWDDEEGNEALKVEELEIRRGDHAAVVGTVGSGKSSLLASVLGEMYKISGKVRVCGTVAYVAQTSWIQNATIQENILFGLPMNQKKYKEVIRVCCLDKDLEMMEHGDQTEIGERGINLSGGQKQRVQLARAVYQDCDIYLLDDIFSAVDAQTGSFIFKECVMGALRHKTILLVTHQVDFLHNVDSIMVMRDGRIVQSGKYDELLKAGLDFGALVAAHESAMEITETGDGFSQSPKLARIPSKEKESAGEKQSQEQSKSDKGSSKLIEEEERETGQVNLRVYKHYFTEAFGWWGVALMLAMSLAWIIAFLAGDYWLAFATSEAYTVPSFIFIIVYAAIAAVSCIVVMIRSFLFTYWGLKTSQSFFIGMLDSILHAPMSFFDTTPSGRILSRVSTDLLWVDISIPLLVSFVMVSYFSLISIIIVTCQNAWETVFLLIPLFWLNNWYRKYYIASSRELTRLDSITKAPVIHHFSETISGVMTIRGFRKQGAFCQENLDRVNASLRMDFHNNGANEWLGFRLDFTGVVFLCIATVFMIFLPSAIIRPEYVGLSLSYGLALSSLLSFTISMTCSVENKMVSVERIKQFTNLPSEAPWTIPERTPPQDWPSHGNIELDNLQVRYRSNTPLVLKGVSLTIQGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKIIIDGINICNVGLHDLRSRFGIIPQEPVLFQGTVRSNIDPLGLYSDEEIWKSLERCQLKDAVTAKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKHSRILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDRVLVIDAGYAKEFDKPSRLLERPTVFGALVKEYSNRASEV 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01149 1499 MobiDBLite consensus disorder prediction 1 20 - -
Aip04g01149 1499 SUPERFAMILY ABC transporter transmembrane region 316 619 IPR036640 GO:0005524|GO:0016021
Aip04g01149 1499 CDD ABC_6TM_ABCC_D1 328 615 IPR044746 GO:0140359
Aip04g01149 1499 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 61 1496 - -
Aip04g01149 1499 CDD ABC_6TM_ABCC_D2 938 1232 IPR044726 GO:0140359
Aip04g01149 1499 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 61 1496 - -
Aip04g01149 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 641 864 IPR003439 GO:0005524
Aip04g01149 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1220 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip04g01149 1499 Gene3D ABC transporter type 1, transmembrane domain 904 1238 IPR036640 GO:0005524|GO:0016021
Aip04g01149 1499 Gene3D ABC transporter type 1, transmembrane domain 312 625 IPR036640 GO:0005524|GO:0016021
Aip04g01149 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 638 860 IPR027417 -
Aip04g01149 1499 Pfam ABC transporter transmembrane region 962 1184 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip04g01149 1499 Pfam ABC transporter transmembrane region 328 595 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip04g01149 1499 CDD ABCC_MRP_domain2 1255 1475 - -
Aip04g01149 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 327 607 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip04g01149 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1248 1490 IPR027417 -
Aip04g01149 1499 CDD ABCC_MRP_domain1 641 841 - -
Aip04g01149 1499 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524
Aip04g01149 1499 MobiDBLite consensus disorder prediction 889 917 - -
Aip04g01149 1499 Gene3D - 636 867 IPR027417 -
Aip04g01149 1499 SUPERFAMILY ABC transporter transmembrane region 939 1243 IPR036640 GO:0005524|GO:0016021
Aip04g01149 1499 Pfam ABC transporter 663 791 IPR003439 GO:0005524
Aip04g01149 1499 Pfam ABC transporter 1274 1422 IPR003439 GO:0005524
Aip04g01149 1499 Gene3D - 1241 1489 IPR027417 -
Aip04g01149 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1257 1491 IPR003439 GO:0005524
Aip04g01149 1499 SMART AAA_5 1283 1467 IPR003593 -
Aip04g01149 1499 SMART AAA_5 668 849 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01149 Aip-Chr4 17584686 17592378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01149 641 869 Calmodulin-binding Proteins AT2G36910 31.200 3.68e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01149 - K05665 gmx:100780167 2441.38