Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01139 ATGGACGGCAACAAGGATGAGGCGCTGCGCTGCCTTCGAATAGCTGAGGAAGCGATCGCAGCCGGCAACAAATCCCGCGCCCTCAAATTCATCGGAATCGCTCAGCGGCTCAACCATAACCTCCCCGTCGATGATTTGCTGAACATGTGCGAGTGCCTCGATTCTCAGTCCTCTGCGTCTTCTTCTTCTTCAGAACATAAAGGTAACGAAAATCGCGTTAAGAGCAAACCGAACGGTATATCGAAAACTGATGACGAGGGTTTGAACGAGGAGAGGAATTACACGGAGGAGAATGTGAAGTTGATTAGGGAAATTAAATTGAAGAGTGATTACTATGCGATCTTGGGAGTTGAGAAGAGTTGTTCGGTTGAAGAGATTAGAAAGGCTTATAGGAAACTTTCCTTGAAGGTTCATCCGGATAAGAACAAGGCACCAGGTTCCGAAGAGGCCTTTAAGAAGGTCTCAAAAGCATTTAAATGCTTGAGTGATGATAGTTCTAGAAGGCAGTATGATCAGACTGGATTGGTGGATGAATTCGAGTACAATCAGCAGTACAGCGTTCCGCGCCGGAGGAGGAGAACGGCAGCAAGCCGGGATTTCTTCGAGGATGATTTCGATCCGGACGAGATATTCAGGGCATTTTTTGGACAATCTGATGTGTTTGGGAGGCAACATGTTTACAGAACAAGGGCAACCACCCATGATCATCATTATCAAAGACATGGTTTTCAGGGTGTTGCAGGTGGAACGGGGCTTAATATTATGCTCCTTGTTCAGTTGTTGCCGTTCTTGATCATTTTGCTGCTTGCTTACCTGCCATTCTCTGAACCTGAGTATTCTCTGTACAAGAATTACTCATACCAGTTTCCCAAGACCATAGAGAATTATGGGATTCAATATTTCGTAAAGTCTCAAGCTTTTGATCGTAACTATCCACAGGGGAGTGCTGCTCGCACTACCATTGAGGACAATCCTGATGAAGGATATCTATTGGAGCACTGCTTGTTAATTGTAACAGCTCTGTGCTACTTGATTTGTTGCCAGTTAAGTGTCATGTTCATCGTGCTCCGAGAAATCTCTGGCAAATATGCTCGAAAATGTGCTCTTGCCGCTGCTGGGACTGACTTGGATGGGATTATCTATTATGTTAGACATGGTTAA 1161 0.4513 MDGNKDEALRCLRIAEEAIAAGNKSRALKFIGIAQRLNHNLPVDDLLNMCECLDSQSSASSSSSEHKGNENRVKSKPNGISKTDDEGLNEERNYTEENVKLIREIKLKSDYYAILGVEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDSSRRQYDQTGLVDEFEYNQQYSVPRRRRRTAASRDFFEDDFDPDEIFRAFFGQSDVFGRQHVYRTRATTHDHHYQRHGFQGVAGGTGLNIMLLVQLLPFLIILLLAYLPFSEPEYSLYKNYSYQFPKTIENYGIQYFVKSQAFDRNYPQGSAARTTIEDNPDEGYLLEHCLLIVTALCYLICCQLSVMFIVLREISGKYARKCALAAAGTDLDGIIYYVRHG 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01139 386 MobiDBLite consensus disorder prediction 67 91 - -
Aip04g01139 386 ProSiteProfiles dnaJ domain profile. 110 174 IPR001623 -
Aip04g01139 386 MobiDBLite consensus disorder prediction 57 91 - -
Aip04g01139 386 PANTHER CHAPERONE PROTEIN DNAJ 49 1 325 - -
Aip04g01139 386 CDD DnaJ 110 163 IPR001623 -
Aip04g01139 386 Pfam DnaJ domain 110 171 IPR001623 -
Aip04g01139 386 Gene3D DnaJ domain 107 227 IPR036869 -
Aip04g01139 386 PRINTS DnaJ domain signature 112 130 IPR001623 -
Aip04g01139 386 PRINTS DnaJ domain signature 146 166 IPR001623 -
Aip04g01139 386 PRINTS DnaJ domain signature 130 145 IPR001623 -
Aip04g01139 386 SUPERFAMILY Chaperone J-domain 109 222 IPR036869 -
Aip04g01139 386 SMART dnaj_3 109 166 IPR001623 -
Aip04g01139 386 PANTHER AT29763P-RELATED 1 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01139 Aip-Chr4 17494446 17497299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01139 4 171 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.168 3.97e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01139 K09518 - sind:105171531 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01139 04 17494446 17497299 Aip04g01139 04 17494446 17497299 ECH