Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01112 ATGGAAAAGAAGGGAAAAATCATAGTATCAGTAGTTGTTTCACTTTCGCTCATCCTTGTGGCGGGAGTTGCCACCGGGATCATCGTGGCCGTTAATAACAAGAAAAGCAATGGCGCTGATGAAGTGCAAAACACTAAAGAAAGGTTCACGAGTCTCATTTGCCGTAACACACAAGAGAATCAAAACCTCTGTCGCGAGGTTCTAAGCCAAGTTGATGGTTCCTCTTCTTCCGACCTGAAAGCATACATCGATGCCGCTGTGAACGATATCAGAGATGGCGTCACCACCGCCCTAAAGATGATGATGACTGAGGAGGAGTTCTCCAAAGATGACAATGGAATCAAGATGGCCATTGATGGTTGCAAAGAAGTTATGGAGTCCGCATTGAGCAGCCTCGACCTTTTCAGCAATGTGCTTCGCAGCAATCACGACATTAACTCCCTGCAACCGCAAATCCCCGACCTCAAGAACTGGCTTAGCGCCGTTATCTCATATCAGCAATCTTGTATTAACATTTTTGAGGATCAAAATAAAGGAGAGAGAAAAATCAAAGAACAACTACAAAGCCTGAGTTTGGATCGTGTTGAGAAGGTTTCCATCATAACTCTTGATATTGTTACTGGTTTGGCTAAGATCATTGAAGATCTTGGCCTGCATGTGGAAATGAAACCCATTGCTTCTTCTGGGCGTGTTCTTCGCGAAGAGGTTGATAACGAGGGGTTCCCCGATTGGTTTTCCTCTTCAGATCGTAAGCTGTTGGCGAAGGATGTGAAGTTTCATGTTCCAAATGTAGTGGTTGCTAAAGATGGTAGTGGAAATTTTAGGACGGTTCAGGATGCAATTAACTCGTACCCAAAGGCAAAGAGTTTTCAGGAAAGGTACATTATCTATGTTAAGGCGGGGATTTATAAGGAGAATTGTACAGTTCCATCTTATGCAATGAACATTTTCATGTATGGTGATGGCCCTACTAAGACCATTATCACTGCTAGTATGAGCAATGTCACCCATAACCTCAAGGCCATGTTTACTGCCACTTTCGTGAATAAAGCGGGAATGTTTCTTGCGAAGGACATGAGGTTCGAGAATGCAGCTGGTGCAAAAGGGCACTAA 1113 0.4385 MEKKGKIIVSVVVSLSLILVAGVATGIIVAVNNKKSNGADEVQNTKERFTSLICRNTQENQNLCREVLSQVDGSSSSDLKAYIDAAVNDIRDGVTTALKMMMTEEEFSKDDNGIKMAIDGCKEVMESALSSLDLFSNVLRSNHDINSLQPQIPDLKNWLSAVISYQQSCINIFEDQNKGERKIKEQLQSLSLDRVEKVSIITLDIVTGLAKIIEDLGLHVEMKPIASSGRVLREEVDNEGFPDWFSSSDRKLLAKDVKFHVPNVVVAKDGSGNFRTVQDAINSYPKAKSFQERYIIYVKAGIYKENCTVPSYAMNIFMYGDGPTKTIITASMSNVTHNLKAMFTATFVNKAGMFLAKDMRFENAAGAKGH 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01112 370 TIGRFAM PME_inhib: pectinesterase inhibitor domain 39 206 IPR006501 GO:0004857
Aip04g01112 370 CDD PMEI-like_3 52 211 - -
Aip04g01112 370 SMART PMEI_2 45 205 IPR006501 GO:0004857
Aip04g01112 370 Pfam Pectinesterase 263 370 IPR000070 GO:0030599|GO:0042545
Aip04g01112 370 Pfam Plant invertase/pectin methylesterase inhibitor 52 204 IPR006501 GO:0004857
Aip04g01112 370 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 210 IPR035513 -
Aip04g01112 370 Gene3D - 260 370 IPR012334 -
Aip04g01112 370 PANTHER PECTINESTERASE 12 370 - -
Aip04g01112 370 PANTHER PECTINESTERASE 12 370 - -
Aip04g01112 370 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 199 IPR035513 -
Aip04g01112 370 SUPERFAMILY Pectin lyase-like 263 370 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01112 Aip-Chr4 16909372 16910875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01112 47 370 Carbohydrate Esterase AT2G26450 32.931 5.54e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01112 K01051 - ahf:112794701 412.149