Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01108 ATGTTGCCGCGGGAGTCCTTCTCGTCTGAAGGTGTCGACGACGCATCGTCTCCTCCAGGCCGCAACAGCAACCACCTCTGTGTCCACGCTGCCCCGCCGCGTCTAGCCACCGACAGTTGCACGCCGCTCTCTGCAATCATCCCGGTGTTCTCCAATTGGTCGAATTTCGATTCTGGACTTTCATGTCATGTAATTTCATTTAATTTCCATTTGCCACTATGTGTTTGTTACTTGGTTATACTTCATAAGGATGTGAAGAGCAATAACATATTGCTTGATCATGAGTTTATGCCTCATGTAGCGAATTTTGGGCTTGCTAAGACCTTGCAGTGTGAGGTGGGCGACAGAGGTGCTGGTGCTGGTGCCGGTGCCATGTCCAGGGTTGCTGGATCATATGAATACATTGCCCCGAGTAAGTTCTTTGGAAGACTTTTGGATATTATTCAAATTGAATGA 456 0.4825 MLPRESFSSEGVDDASSPPGRNSNHLCVHAAPPRLATDSCTPLSAIIPVFSNWSNFDSGLSCHVISFNFHLPLCVCYLVILHKDVKSNNILLDHEFMPHVANFGLAKTLQCEVGDRGAGAGAGAMSRVAGSYEYIAPSKFFGRLLDIIQIE 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01108 151 SUPERFAMILY Protein kinase-like (PK-like) 79 145 IPR011009 -
Aip04g01108 151 MobiDBLite consensus disorder prediction 1 20 - -
Aip04g01108 151 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01108 151 Gene3D Transferase(Phosphotransferase) domain 1 73 146 - -
Aip04g01108 151 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 77 138 - -
Aip04g01108 151 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Aip04g01108 151 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 77 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01108 Aip-Chr4 16788838 16789692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01108 80 137 Receptor kinase-like Gene Family AT5G65710 63.793 3.87e-15 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip04g01108 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01108 - - aip:107642268 170.629