Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01090 ATGGTGCATGATGACGATGAAGCTGATGATGAAACATTTGCTTCACATGCTGATGAATATGCAAAAAACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATACGACCAGCCTTAGGTAGGCAGCAGTCTGTGTCAGACAGGGCAAAGAGTGCAATGCAAGGATATCTGAATCACTTTTTGGGAAATATCAGTATTGTTAACTCTCCAGAGGTCTGCAAGTTTTTAGAGGTATCGAAGCTATCTTTTTTGCCTGAATATGGACCTAAGCTGAAAGAAGATTATGTAATGGTGAAACATCTGCCCAAAATTCCAAAGGATGATGATTCCAGAAAGTGTTGTACATCTAGCTGTTTTAGTTGTTGTAATGACAACTGGCAAAAGGTATGGGCTGTATTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTTGATAAGCAGCCCTTAGACATTATTGTCTTTGATGTGCTGCCTCCATCGGATGGGAATGGGGATGGTCGTCTGTCACTGGCTAGTGAAATAAAGGAACGAAATCCTTTACGCCATTCATTCAAGGTGACGTGCGGTATCCGGAGCATTAGAATTAGAGGGAAAAGTAGCAGTAAAGTTAAAGATTGGGTTGCAGCAATTAATGATGCTGGACTTAGGCCTCCTGAAGGCTGGTGTTATCCTCACCGCTATGGGTCATTTGCTCCTCCAAGAGGCTTAATTGAAGATGGTAGTCAAGCCCAATGGTTCGTGGATGGGCAAGCAGCATTTGATGCAATTGCTTCTTCAATTGAGGATGCAAGATCAGAGATATTCATCTGTGGATGGTGGGTATGCCCAGAACTGTATCTCAGGCGACCTTTTGACATTCATGCATCATCAAGGCTTGATAATTTGTTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATCTACATTCTTCTGTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTCTATAGCAAGAGAAAGCTTCTTAGCATTCATGAGAACGTGAGGGTACTACGCTATCCTGATCACTTTTCTTCTGGTGTTTATCTATGGTCTCACCATGAAAAACTGGTCATTGTCGATAACCATATTTGCTTCATTGGAGGACTGGATTTGTGCTTTGGCCGTTATGACTCATCTGAGCATAAAGTGGGGGATTGCCCTCCTCTAATCTGGCCTGGAAAGGACTTTTATAACCCTAGGGAATCTGAACCTAATTCATGGGAAGATACAATGAAAGATGAATTGGATCGTAGAAATTATCCTCGTATGCCTTGGCATGATGTTCATTGCGCCCTTTGGGGACCACCTTGTCGTGATATTGCTCGGCACTTTGTTCAAAGATGGAATTATGCGAAGAGGAATAAAGCTCCGTATGAGGAAGCAATACCTTTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCACTGAGATGGAGATTGAAAACAATAATGCTGAGAATCATAGAGTCATCAAGAGAGAAGATTCATTTTCTTCATTATCCCAAGAACAAGATGTTCCTCTACTTTTGACTCGTGATGAGTCTGAAGGAGACCCCAAAATGAACGGGTTAAACTTCATACATCACGTTGATAAGCCAATAAAGGTTGGTGGTGGTCTTCCTTTCTCTTTTCGGAGGGTGAAAATTGAAGCTGTTGGTCAAGACACCCCAATGAAGGGCTTTGTAGATGATCTTGGATATATGCATTATGATGAGAAAAAGTCTCTGGATAGAGTGCCTCATGTTGAGCAACAAAGTACTGGTCCAGAATGGTGGGAAACACAAGAGCGTGGTGATCAGGGAGATTTTGCAGATGAATCAGGGCAAGTTGGCCCTCGTGTTTCCTGCCGTTGTCAGGTTATTAGGAGCGTCAGTCAATGGTCTGCTGGAACAAGCCAAACGGAAGAGAGCATACACAATGCCTATTGCTCTCTTATTGAAAAAGCAGAATACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCTGGAGATGAAATGATTCGGAACCGTGTTTTGGAAGCTTTGTATCGACGGATTATGCTAGCATACAATGAAAATAAATCCTTTCGGGTTATCATTGTCATACCTCTCCTACCTGGCTTCCAGGGGGGTCTTGATGATAGTGGTGCAGCATCTGTGAGAGCAATAATGCACTGGCAGTATCGAACCATTTGTAGAGGGCAGAATTCTATATTACATAATCTTTATGAACTTCTTGGTTCAAAAATACATGACTACATCTCTTTTTTTGGCTTGAGGTCTTATGGTAGACTTTTTGATGGTGGTCCTGTAGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATCGCATAAGTTTGATTGGATCTGCTAATATTAATGATAGAAGCCTGCTTGGATCTAGAGATTCTGAGATTGGAGTAGTTATAGAAGACAGAGAGCTCATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAGTTCTCCTTGACTCTGCGTTTGTCATTATGGTCTGAGCACTTGGGTCTACCAGCAGGAGAGGTCAATCAAATAATGGACCCGATTATTGAATCATCTTACAAAGATATTTGGATGGCAACAGCAAAGACAAATACTGCAATTTACCAGGATGTCTTTTCTTGTGTACCTAATGATCTAATCCACACCAGACTTGCTTTCAGACAGAGTGTAGCCTTTTGGAAAGAAAGAATTGGTCACACAACCATTGATTTAGGAATAGCGCCGCAAAAATTAGAATCCTATCATGATGGAGATATCAAGAACACTGATCCATTGCAGAGATTAGCATCAGTGAGGGGTCATCTTGTTTCTTTTCCTTTGGAGTTCATGTGCCAAGAAAGTCTAAGACCTGGTTTCAGTGAAAGCGAATATTACGCCGCTGCTCAAGTTTTCCACTGA 2949 0.4171 MVHDDDEADDETFASHADEYAKNRDVPSSAALPIIRPALGRQQSVSDRAKSAMQGYLNHFLGNISIVNSPEVCKFLEVSKLSFLPEYGPKLKEDYVMVKHLPKIPKDDDSRKCCTSSCFSCCNDNWQKVWAVLKPGFLALLADPFDKQPLDIIVFDVLPPSDGNGDGRLSLASEIKERNPLRHSFKVTCGIRSIRIRGKSSSKVKDWVAAINDAGLRPPEGWCYPHRYGSFAPPRGLIEDGSQAQWFVDGQAAFDAIASSIEDARSEIFICGWWVCPELYLRRPFDIHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDNHICFIGGLDLCFGRYDSSEHKVGDCPPLIWPGKDFYNPRESEPNSWEDTMKDELDRRNYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEEAIPLLMPQHHMVIPHYLGRSTEMEIENNNAENHRVIKREDSFSSLSQEQDVPLLLTRDESEGDPKMNGLNFIHHVDKPIKVGGGLPFSFRRVKIEAVGQDTPMKGFVDDLGYMHYDEKKSLDRVPHVEQQSTGPEWWETQERGDQGDFADESGQVGPRVSCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMLAYNENKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGSKIHDYISFFGLRSYGRLFDGGPVATSQVYVHSKIMIVDDRISLIGSANINDRSLLGSRDSEIGVVIEDRELIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPAGEVNQIMDPIIESSYKDIWMATAKTNTAIYQDVFSCVPNDLIHTRLAFRQSVAFWKERIGHTTIDLGIAPQKLESYHDGDIKNTDPLQRLASVRGHLVSFPLEFMCQESLRPGFSESEYYAAAQVFH 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01090 982 Pfam PLD-like domain 775 825 IPR025202 -
Aip04g01090 982 SUPERFAMILY Phospholipase D/nuclease 207 471 - -
Aip04g01090 982 CDD PLDc_vPLD1_2_yPLD_like_2 638 822 - -
Aip04g01090 982 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 778 805 IPR001736 GO:0003824
Aip04g01090 982 MobiDBLite consensus disorder prediction 1 20 - -
Aip04g01090 982 Gene3D Endonuclease Chain A 237 476 - -
Aip04g01090 982 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 351 378 IPR001736 GO:0003824
Aip04g01090 982 Pfam Phospholipase D Active site motif 351 378 IPR001736 GO:0003824
Aip04g01090 982 PANTHER PHOSPHOLIPASE D 5 979 IPR015679 -
Aip04g01090 982 SUPERFAMILY PH domain-like 122 214 - -
Aip04g01090 982 SMART pld_4 778 805 IPR001736 GO:0003824
Aip04g01090 982 SMART pld_4 351 378 IPR001736 GO:0003824
Aip04g01090 982 PANTHER PHOSPHOLIPASE 5 979 - -
Aip04g01090 982 Gene3D - 117 216 IPR011993 -
Aip04g01090 982 CDD PLDc_vPLD1_2_yPLD_like_1 244 389 - -
Aip04g01090 982 SUPERFAMILY Phospholipase D/nuclease 619 828 - -
Aip04g01090 982 PIRSF PLD_euk 478 982 IPR016555 GO:0004630|GO:0006654|GO:0048017
Aip04g01090 982 PIRSF PLD_euk 3 496 IPR016555 GO:0004630|GO:0006654|GO:0048017
Aip04g01090 982 SMART PH_update 90 218 IPR001849 -
Aip04g01090 982 CDD PH_PLD 67 214 - -
Aip04g01090 982 Gene3D Endonuclease Chain A 579 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01090 Aip-Chr4 16316679 16328284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01090 2 858 Phospholipase D Gene Family (Wang group) AT3G16785 73.788 0.0 1226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01090 K01115 - gmx:100780514 1786.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01090 04 16316679 16328284 Aip04g01090 04 16316679 16328284 ECH