Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01089 ATGGTTCTTTTTCCATCTCTTCTCAATGGATTTGCAAGAAAGAAAAGTTGTCCAAACGATGATGACAATGATGAAAGGAAAGCCGTGAAAGCACTCGCGAAGGAAGCAAGGAAGAATGGCTTGTTATTGAGTTCATCAGGAACTGTTAAGTCTTCCAAAGCCAACAACTTTGCCTCAATTTTCACAAAGAAGGGCCAGAAAGGAGTCAATCAAGATCGCCTTATTGTTTGGGAGGAATTTGGTTGGCAAGAAGACATGATATTGTGTGGAGTTTTTGATGGACATGGCCCTTGGGGACACTATGTGTCCAAAAGTGTCATGAAACTTGTCCCTGCCTCTTTGCTATGCAATTTGAAGGAAAATCTTGCTGCAACATCTCTTGACCTGAATTACAAGATGGAAGCAGATAGGAGGAACCACCATGAATTTGACATATGGAAGCAAGCATGCATAAAGACTTGTGCTGCTGTTGATCATCATCTAAAGCAGAATACTGGGATTGATTCCTTTCAAAGTGGTACTACAGCTTTGACAGTTATCAAACAGGGTGAAGATCTGATTATATCAAACTTAGGAGATTCAAGGGCAGTATTGGCAACAACTTCAGATGGTGGCACACTAAGTGCCCTTCAGCTTACAACTGACATGAAGCCAAATTTACCAAAGGAGGCAGAGAGGATAATGGAATCAAGAGGGAGGGTGTTTTGTCTAGAAGATGAGCCAGGAGTGTATAGGGTGTGGATGCCAAATGTTTTAACAGCTTCTGCCCGAAAAGACTTGGCTAAACCTCTCGTGCTCTTTCTAGGAGAGTCATATTCATTCGTTCTGTTACACTATTTTGCTGAAGCATATATGCAACTGTGA 864 0.4167 MVLFPSLLNGFARKKSCPNDDDNDERKAVKALAKEARKNGLLLSSSGTVKSSKANNFASIFTKKGQKGVNQDRLIVWEEFGWQEDMILCGVFDGHGPWGHYVSKSVMKLVPASLLCNLKENLAATSLDLNYKMEADRRNHHEFDIWKQACIKTCAAVDHHLKQNTGIDSFQSGTTALTVIKQGEDLIISNLGDSRAVLATTSDGGTLSALQLTTDMKPNLPKEAERIMESRGRVFCLEDEPGVYRVWMPNVLTASARKDLAKPLVLFLGESYSFVLLHYFAEAYMQL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01089 287 SMART PP2C_4 48 277 IPR001932 -
Aip04g01089 287 SUPERFAMILY PP2C-like 51 236 IPR036457 -
Aip04g01089 287 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 253 - -
Aip04g01089 287 Gene3D - 44 264 IPR036457 -
Aip04g01089 287 CDD PP2Cc 56 235 IPR001932 -
Aip04g01089 287 Pfam Protein phosphatase 2C 138 235 IPR001932 -
Aip04g01089 287 ProSiteProfiles PPM-type phosphatase domain profile. 57 287 IPR001932 -
Aip04g01089 287 PANTHER ALPHABET, ISOFORM E-RELATED 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01089 Aip-Chr4 16290855 16294822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01089 1 253 PP2C-type Phosphatase Gene Family AT5G27930 54.086 1.07e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01089 - - aip:107636155 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01089 04 16290855 16294822 Aip04g01089 04 16290855 16294822 ECH