Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01086 ATGGGACAAGAATCAGATTACAAAAGCCAACTGGTATTGGAGATTTGCTCAATTTCCACACGTTCTGTTGTATGTGTTCATAGACTTGTCCCTAACAAAACTAATAAGCCACCTTTCATTGATTGGTACTGCATTCTTGGAGTGGCAGGAAATGCAGATGTAAATACAATCCGAAAGCAGTACCATAAACTTGCCTTGCAACTTCATCCAGATAAGAATAAGCACCCCAAGGCTGAAATTGCATTCAAGCTTCTATCTGAGGCATATGCATGTTTATCTGATGCAGCAAAAAGAAAAGCTTTTAACTTGGAGAGAAGCAAGAGTTTATGCATTGAGTGCAACAGAATCCCTAGCAATTCAAACAATAATAACGGATCTTCTTCAAGTTTCAAATCATCAAGGAGTAGTAGCATCAGCAGTAGTTCAAGATCATGTAAGCTTTGGCGAAACATCAATGACATAAGAGAAAGTTTAAGGGAAGAAGCTAAGGTGATAGAGAAATGTTTGAGGGTAAATAATTCAATGCCAACAAAGAATTATGATGATGATTATATGCATAGAAGTAGAGGGCCTAATAACAATAATAATAAGCATAGAGTTGAGAAAGAAACACCAGTTTTCAATCCATCAAATTACTTGTACCAAGGGTACCCTCATAGGAGAAATCATGTTAACAAGGATTATTCTGAGAAATTTTGGTACTTGCAGCAAGAAACTAATGCAGTGCAAAGTAATAACTATTCCAAGGGAGGATCAGATAAGTTTTCTTCATCAGTTTTTGAGGCTGAAACACAGAGGAGCATGTTCAGTAGAAAATTTGGTCCTATCCCCTCACAATGTTAG 843 0.3689 MGQESDYKSQLVLEICSISTRSVVCVHRLVPNKTNKPPFIDWYCILGVAGNADVNTIRKQYHKLALQLHPDKNKHPKAEIAFKLLSEAYACLSDAAKRKAFNLERSKSLCIECNRIPSNSNNNNGSSSSFKSSRSSSISSSSRSCKLWRNINDIRESLREEAKVIEKCLRVNNSMPTKNYDDDYMHRSRGPNNNNNKHRVEKETPVFNPSNYLYQGYPHRRNHVNKDYSEKFWYLQQETNAVQSNNYSKGGSDKFSSSVFEAETQRSMFSRKFGPIPSQC 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01086 280 MobiDBLite consensus disorder prediction 121 140 - -
Aip04g01086 280 Pfam DnaJ domain 41 102 IPR001623 -
Aip04g01086 280 Gene3D DnaJ domain 40 164 IPR036869 -
Aip04g01086 280 ProSiteProfiles dnaJ domain profile. 41 105 IPR001623 -
Aip04g01086 280 MobiDBLite consensus disorder prediction 179 200 - -
Aip04g01086 280 PANTHER BNAC03G44070D PROTEIN 4 270 - -
Aip04g01086 280 SMART dnaj_3 40 97 IPR001623 -
Aip04g01086 280 PRINTS DnaJ domain signature 43 61 IPR001623 -
Aip04g01086 280 PRINTS DnaJ domain signature 61 76 IPR001623 -
Aip04g01086 280 PRINTS DnaJ domain signature 77 97 IPR001623 -
Aip04g01086 280 MobiDBLite consensus disorder prediction 180 200 - -
Aip04g01086 280 CDD DnaJ 41 94 IPR001623 -
Aip04g01086 280 ProSitePatterns Nt-dnaJ domain signature. 82 101 IPR018253 -
Aip04g01086 280 SUPERFAMILY Chaperone J-domain 36 103 IPR036869 -
Aip04g01086 280 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01086 Aip-Chr4 16210079 16211518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01086 41 102 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.909 2.80e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01086 - - adu:107483537 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01086 04 16210079 16211518 Aip04g01086 04 16210079 16211518 ECH
Aip01g02854 01 130417929 130419180 Aip04g01086 04 16210079 16211518 PCT