Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01059 ATGGCCTTGCATGACCATGTCTTCTTCTACATCTTTGTCATCATCTCCGCCGCGCCATTATCGCTCTCTCAGCCACAAGCCGCCTCCTCCTGCAACGGAATATTCCTTTCTTACACTTACACCAGCGGCTACCGCCTGCCGCCGAACACGTCCGACACCGCGGACCAGCCATACCGGTTCACGTCGGAGCTGACGGTGCTAAACAACGGCCTAGAGGATCTGAAGTCATGGAAGGTGTTCGTGGGTTTCCGGCACCGAGAGTGGCTGGTTTCGGCGTCGAACGCGGAGCTGGCAGACGGCACAGGGCTCCCTGCTGCCGTCGGAAACGGGACAGTTTTGGAGGGGTCCGAGGTGAGGGACTTGAAGACGGCAGCGGAGACGGCGGGGGACTTAAAACAGATGATGGTAACGGTGGACATGGTGGGGACGGTGTTTGGGGTGGCGCCACCCAATGTTCCCATGCCTTCCACCATTAGGCTCTCTAATGAAGGTTTTATTTGTCGTAAACCCACTTCTCAAGGTAACAATGAGACACATACATGTTGCACAGTTGATCCCAATTCCAAAACAAACACACCCACAGATGAACAAGAATTTCCACTCCCTCAGAAAGGTGGTGACCTTAGCATAATCTATGATGTCACAAAAACATATGAATCCAATTACTGGGCAGAGGTCACAGTTTCAAACAACAACCCCATTGGCCGTCTTGACCATTGGAAACTCAGCTGGGAATGGATCAATGATGAGTTCATATACACAATGAAAGGTGCATATCCATCAAACGTTGATTCTTCTGAATGTATCTTTGGTTCACAAGGTGAGTACTACAAGAAACTTGACTTTGCCGATGTGTTGAACTGCGAAAGAAGGCCAACCGTAGTTGATCTCCCTCCAACAAGGTTCAATGATTCAAAACTTGGTAAAGTCCCATTTTGCTGCAGAAATGGTACATTGTTGCCACCCACAATGGATCCTAGTAAGTCAATTTCAAGGTTCCAAATGCAGGTCTTCAAGATGCCTCCAAACATCAATCGTTCCCACCTTGCGCCACCTAGGAACTGGAAGATAAGTGGTGAGGAACTCAACCCTGAATACCAATGTGGGAATCCTGTTAGGGTGAGTCCTAGTGAGTCTTTGGATCCAACAGGTTTGCCATCAAATACATCTGCAATTGCAAGTTGGCAAATTCTCTGCAACATAACAAGGAACACAAGAAAAAGCAAATGTTGTGTCTCATTTTCAGCTTTTTTCAATGAATCTGTTGTTCCCTGCCAAACATGTGCATGTGGATGCTCCGCGAAGTCAGAGAGGACGTGCAGTGTGGCTGAACCGGCTGTTCTGCTTCCCCCGGAGGCACTTCTTGTTCCATTTGAGAATAGAACAAAAATGGCTCATACTTGGGCTGACAGAAAGCATCTATCAGTGCCTAATCCTATGCCTTGTGGTGATAACTGTGGTGTGAGCATCAACTGGCATGTGAATACAGATTACCGGCGAGGTTGGACTGCAAGGATCACGCTTTTCAACTGGGGCGAAACTGATTTCGCAGACTGGTTTGTCGCAGTGGAAATGGATAAAGCAGCCCCTGGTTTTGAGAAAATGTACTCATTCAATGCTAGTTCATTAGACAAAGTGAAGAACACAATATTCATGCAAGGAAAGGAAGGATTGAACTTCCTTGTAGCCGAAGCAAATGGATCCAACCCAAAAAAAGATCCGAAGGTGCCCGGGAAACAACAATCCGTGATCTCATTTAGAAAGAAAAATACTCCTGGAATCGAAGTGGTAGATGGTGATGGATTTCCCAATAAAGTATTCTTCAATGGTGAGGAATGTTCTCTTCCTTTGGTATATCCAAGCAGTGGTTTCAGGAATGAGTTTTCTTTTGTTCCCATGTTGCTCCTGATGTTGTTGCCAATCATATGGATGTGGCAATAG 1941 0.4688 MALHDHVFFYIFVIISAAPLSLSQPQAASSCNGIFLSYTYTSGYRLPPNTSDTADQPYRFTSELTVLNNGLEDLKSWKVFVGFRHREWLVSASNAELADGTGLPAAVGNGTVLEGSEVRDLKTAAETAGDLKQMMVTVDMVGTVFGVAPPNVPMPSTIRLSNEGFICRKPTSQGNNETHTCCTVDPNSKTNTPTDEQEFPLPQKGGDLSIIYDVTKTYESNYWAEVTVSNNNPIGRLDHWKLSWEWINDEFIYTMKGAYPSNVDSSECIFGSQGEYYKKLDFADVLNCERRPTVVDLPPTRFNDSKLGKVPFCCRNGTLLPPTMDPSKSISRFQMQVFKMPPNINRSHLAPPRNWKISGEELNPEYQCGNPVRVSPSESLDPTGLPSNTSAIASWQILCNITRNTRKSKCCVSFSAFFNESVVPCQTCACGCSAKSERTCSVAEPAVLLPPEALLVPFENRTKMAHTWADRKHLSVPNPMPCGDNCGVSINWHVNTDYRRGWTARITLFNWGETDFADWFVAVEMDKAAPGFEKMYSFNASSLDKVKNTIFMQGKEGLNFLVAEANGSNPKKDPKVPGKQQSVISFRKKNTPGIEVVDGDGFPNKVFFNGEECSLPLVYPSSGFRNEFSFVPMLLLMLLPIIWMWQ 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01059 646 PANTHER COBRA-LIKE PROTEIN 7 2 642 - -
Aip04g01059 646 Pfam COBRA-like protein 222 402 IPR006918 GO:0010215|GO:0031225
Aip04g01059 646 PANTHER COBRA-LIKE PROTEIN 7 2 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01059 Aip-Chr4 15427388 15430445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01059 15 629 COBRA Gene Family AT4G16120 61.137 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01059 - - mtr:MTR_2g034950 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01059 04 15427388 15430445 Aip04g01059 04 15427388 15430445 ECH
Aip01g02864 01 130612193 130614638 Aip04g01059 04 15427388 15430445 PCT