Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01056 ATGCCACTGGAGCTCCTGTCACCGTCAGAAGTTACCGCCATGGCCGCCACCCTCCCAGCGGTTGCAGTGGTTGTTGCCTGTCGTGTATGGCCTCCGGGGAAGTTGCTATGGCCGCTGGAACCACTGCTGGAGCTGTGGTTACTCGGTTCTTGGTTCTTTCTTGGATCTGAGGCTATGTTTGCAGACTTGGGTCACTTTAATGTAAGAGCAATTCAAATCAGCTTCACTTTGATTACATGTCCTGCAATATTGTGTGCATATACTGGGCAAGCTGCATTTCTTCGAAAGTTCCCTGAAAAAGTGGGCAATACTTTCTATGAAAGTCTACCAAATCCCATATACTGGCCAACATTTGTCGTGGCTATTGGTGCTGCCATCATAGCAAGCCAAGCAATGATTTTAGGAGCATTTCCATCATATCACAGGCCCTGA 432 0.4815 MPLELLSPSEVTAMAATLPAVAVVVACRVWPPGKLLWPLEPLLELWLLGSWFFLGSEAMFADLGHFNVRAIQISFTLITCPAILCAYTGQAAFLRKFPEKVGNTFYESLPNPIYWPTFVVAIGAAIIASQAMILGAFPSYHRP 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01056 143 Pfam K+ potassium transporter 53 137 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip04g01056 143 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 54 137 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip04g01056 143 PANTHER POTASSIUM TRANSPORTER 5 54 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01056 Aip-Chr4 15354046 15355284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01056 46 137 Inorganic Solute Cotransporters AT4G13420 62.105 4.35e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01056 K03549 - gmx:100786294 144.436