Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01045 ATGGCAATGGCGGCGGTGGAGCAAAGAATGGTTCTTTATAGAGCGCAACAGGTGAAGAAGATTAGACATGGACCGAGGTCCCGAAGCTCAGAGTATCGCGGCGTCACCTTCTATCGAAGGATCGGACAATGGTTAATGCACTGTCTAACTAACCTTATTGCAGTTTCTAAGGATGATGATATAATCTGTAACAGGTACAATATACTTGATCAAGGTTTTGTTAAGGAATCGGTGTTTTCATTTTGGCTGAACCGTAACCCAGAGGAAGAGAATGGAAGCGAACTTGTTTTTGGAGGTGTTGATCCCAATCACTACAAGGGAAAGCACACTTATGTGCCTTTGTCAAGAAAAGGATATTGGGAGGTTAATCATTAA 375 0.4267 MAMAAVEQRMVLYRAQQVKKIRHGPRSRSSEYRGVTFYRRIGQWLMHCLTNLIAVSKDDDIICNRYNILDQGFVKESVFSFWLNRNPEEENGSELVFGGVDPNHYKGKHTYVPLSRKGYWEVNH 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01045 124 SUPERFAMILY Acid proteases 65 123 IPR021109 -
Aip04g01045 124 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 63 122 IPR001461 GO:0004190|GO:0006508
Aip04g01045 124 Gene3D - 66 124 - -
Aip04g01045 124 ProSiteProfiles Peptidase family A1 domain profile. 1 124 IPR033121 -
Aip04g01045 124 Pfam Eukaryotic aspartyl protease 61 123 IPR033121 -
Aip04g01045 124 PANTHER ASPARTIC PROTEINASE-LIKE 63 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01045 Aip-Chr4 15152132 15153135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01045 9 47 AP2-EREBP Transcription Factor Family AT5G60120 61.538 3.25e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01045 K08245 - adu:107479281 122.094