Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01020 ATGGCGTTCTGGTGGTCCTTGCTCGTTCTCGCACTCGCTTTCGCCATCGGCAAGTTCCTCCTCTGGCTCATTCCTCCTAAGGTTCCTTCCATCGATGTTGACGCTTCCGATGTTTTAGACGATGGAAACCAAGCTCAGGAGAACAGCTTCATATATGTACCTCCAAGGGGAGCGGCACAGCAATCTGGCACTAAAGTTCAGTGCTATGAGCCTGCTACCATGAAGTATTTGGGATATGTTCCTGCTTTGACCGCAGATGAGGTCAGGGAGCAAGTGGAAAAAGTGCGGAAAGCCCAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGACGCCAATTCTTGCGTATACTTTTGAAGTATATAATAAAACATCAAGCGCTTATATGCGAAATATCTTCGCGTGATACTGGAAAGACAATGGTGGATGCCTCTTTGGGAGAAATAATGACAACATGTGAGAAGATCCATTGGCTACTGTCAGAGGGTGAGAAGTGGCTGAAACCTGAATACCGATCCAGTGGAAGATCAATGCTTCATAAGAGTGCTAGAGTAGAATTTCACCCCCTTGGTGTTATTGGTGCCATTGTGTCATGGAACTATCCGTTCCACAATATTTTCAACCCTATGTTGGCAGCACTTTTTTCTGGAAATGGCATTGTGATTAAGATATCAGAAAACGCAAGTTGGTCTGGGTGCTTTTACTTCCGAATCATCCAGTCAGCACTTGCTGCCATAGGTGCTCCAGAGGACCTTGTTGAGGTGATAACAGGATTTGGTGAAACAGGAGAAGCATTGGTGTCTTCTGCTGATAAAGTCATTTTTGTTGGATCACCTGGTGTTGGCAAGATGATAATGAGAGGTGCTTCCGAGACACTTATACCTGTTACACTTGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGACCATGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTGTGCTGGAGCTGAACGTTTTTATGTCCACAGGAGCATATATTCATCTTTTGTCAGTAAAGTTACCCAAATTATAAAATCTGTTACAGCTGGTCCACCACTGGCTGGAAGGTATGACATGGGAGCTCTATGCATGCATGAGCATTCTGAAAAACTTGAAGGCCTTGTCCATGATGCTATAGATAAAGGTGCTGAAATTGTTGCAAGAGGAAGTTTCGGGCCTATTGGTGGAGATGCAGTTGATCAGTATTACCCCCCAACTGTGATTGTTAATGTGAATCACTCCATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTCAGCTCTGATGAAGAGGTTGTCAAGCTTGCAAATGACTCAAGATATGGGCTTGGCTGTGCTGTTTTCTCAGGCAATCAGAGCCATGCCAGAGAGATAGCTTCGCAGATACATTGTGGCTTTGCTGCTGTTAATGATTTTGCAGCAACATATATGTGTCAGTCCCTCCCATTTGGGGGTGTCAAACACAGTGGATTTGGACGATTTGGTGGTGCAGAGGGTTTGCGAGCATGCTGCCTTGTAAAAGCTGTTGTTGAAGATAGATGGTGGCCATACATAAAAACCGTGATACCTAAGCCTATTCAGTATCCTGTAGCAGAAAATGCCTTCGAATTTCAGGAGTCACTAGTTGAAGCACTATATGGTCTCAGCATATGGGACCGTTTGAAAGCATTGGTAAGCGTTTTAAAAGTACTTACTGAGCAGAATTCTACCAACAGCAGTAAGTTGAAATGA 1785 0.4409 MAFWWSLLVLALAFAIGKFLLWLIPPKVPSIDVDASDVLDDGNQAQENSFIYVPPRGAAQQSGTKVQCYEPATMKYLGYVPALTADEVREQVEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKIHWLLSEGEKWLKPEYRSSGRSMLHKSARVEFHPLGVIGAIVSWNYPFHNIFNPMLAALFSGNGIVIKISENASWSGCFYFRIIQSALAAIGAPEDLVEVITGFGETGEALVSSADKVIFVGSPGVGKMIMRGASETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHRSIYSSFVSKVTQIIKSVTAGPPLAGRYDMGALCMHEHSEKLEGLVHDAIDKGAEIVARGSFGPIGGDAVDQYYPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVKLANDSRYGLGCAVFSGNQSHAREIASQIHCGFAAVNDFAATYMCQSLPFGGVKHSGFGRFGGAEGLRACCLVKAVVEDRWWPYIKTVIPKPIQYPVAENAFEFQESLVEALYGLSIWDRLKALVSVLKVLTEQNSTNSSKLK 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01020 594 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Aip04g01020 594 SUPERFAMILY ALDH-like 57 533 IPR016161 GO:0016491
Aip04g01020 594 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Aip04g01020 594 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Aip04g01020 594 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Aip04g01020 594 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Aip04g01020 594 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
Aip04g01020 594 CDD ALDH_F15-22 69 531 - -
Aip04g01020 594 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01020 Aip-Chr4 14624047 14633104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01020 1 594 Aldehyde Dehydrogenase Gene Family AT3G66658 77.946 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01020 - - gmx:100816920 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01020 04 14624047 14633104 Aip04g01020 04 14624047 14633104 ECH