Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01013 ATGATCTCTCTCTATCATCCCTTGTGTCGCACGAGCTCCCTCTGCCGCCGCTCTCATCGCGTCTGCTCCCTTAGTCGCCATCGTTGCAGAGCCCTCTTCGCCGCTCTCGTCACATCTGCTCCCTTCATCGCCGAGCTTAATTTGGTGAGGGATAGGAGGAGTGATAATAGTTGGAAGAAAAGCAAAACACATTATATAGTAACTTCTTACCTTCGGCCATTACTTTTATGGACTGGAGCAATACTCTTTTGTAGAGCATTGGAACCAGTAATTCTACCTACAAAAACTAGCTAG 294 0.4728 MISLYHPLCRTSSLCRRSHRVCSLSRHRCRALFAALVTSAPFIAELNLVRDRRSDNSWKKSKTHYIVTSYLRPLLLWTGAILFCRALEPVILPTKTS 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01013 97 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 41 97 - -
Aip04g01013 97 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 41 97 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01013 Aip-Chr4 14424372 14426003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01013 41 97 Mechanosensitive Ion Channel Family AT5G10490 50.877 1.44e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01013 K22047 - vvi:100855017 83.1889