Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01007 ATGTTGCTGGAGAACTTCAAAGAACATCTTGCTTTGTCTGTGAGAAGCATCCAGTGGAGCTATGCAATATTCTGGTCTACTTCATCTACCCAACCCGGGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAGACAAGTCAAGGAGTGGAACTCAATTTTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCTCAAAGCTGTAGAAGCCAGCCCTCAAACCAAAAGGCGTTCAGCAGCACTGTCTCCGGAGGATCTCACAGATACAGAATGTGAAGAGGCAGGTTGGGATGTGGAGTTGAAAGCTAGAGGAATTAACAATAAGCACACTCTTGCTTATCAGAGTCGAGTGGACCCGGTACAGTGGTTGAAACCATATACAGATGAAACTCTCGTTGAGCTTGGTCAGAAAGGTGTGAGGAGTCTTTTAGCTGTTCCAGTGAGGTAA 483 0.4617 MLLENFKEHLALSVRSIQWSYAIFWSTSSTQPGVLSWGEGYYNGDIKTRKTSQGVELNFDQIGLQRSEQLRELYKSLKAVEASPQTKRRSAALSPEDLTDTECEEAGWDVELKARGINNKHTLAYQSRVDPVQWLKPYTDETLVELGQKGVRSLLAVPVR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01007 160 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 105 IPR025610 -
Aip04g01007 160 SUPERFAMILY Chelatase 109 159 - -
Aip04g01007 160 Pfam Ferrochelatase 102 159 IPR001015 GO:0004325|GO:0006783
Aip04g01007 160 Gene3D - 68 160 - -
Aip04g01007 160 PANTHER TRANSCRIPTION FACTOR EGL1 5 102 - -
Aip04g01007 160 PANTHER TRANSCRIPTION FACTOR TT8 5 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01007 Aip-Chr4 14247303 14249466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01007 4 102 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 63.810 2.64e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01007 - - aip:107636116 317.39