Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00995 ATGGCTTCTTCTTTTCATGCTTCTTCAGCAATAATATCATCCATAATAGTGTCAATAATTATTCTCATTTGCATGCCATGTTCTGCTTTTGGCTTTATTAATGAGAAAGAGGTTATAGATGCTCCTTTGTTAACACAAAAGTTAGGAATTAATCGCACCATCAAAGTAGATATTAATGGCAATGGGGACTTCAAATCTGTTCAAGCTGCCATTGATTCCATTCCCGAAGGGAATTCCAATTGGGTCATTGTCCATGTTAGGAAAGGAGTATACAGAGAAAGGGTACACATACCAAAGACTAAGCGTTACATATTCATGAGAGGGAATGGAAAGGGAAGAACAGCCATAGTTTGGTCTCAAAGCTCCTCCGATAACATTGATTCTGCTACCTTCAAAGTTGAAGCCCGTGATTTCATTGCATTTGGAATTAGCTTCAAGAACGAAGCACCAACGGGTATTGCATATACCTCACAGAATCAATCGGTGGCAGCATTTGTGGCTGCAGATAAAATTGCATTTTACCATTGTGCATTTTTCAGTACTCATAACACTCTCTTTGATTACAAAGGCAGACACTACTATGAGTCTTGCTACATTCAAGGCTCAATTGATTTCATTTTTGGCCGTGGCAGATCCATCTTTGAGGGGTGTGAGATATTTGTAATTGATGACAAAAGGGTCACAATTCATGGGTCAATCACAGCACAAAACAGGGAGAGTGAACGAGAGATAAGTGGATTCATATTCAATAAATGCAGGGTTTATGGCATTGGTGGGGTGTACCTAGGAAGGGCTAAGGGTCCTTATTCTAGGACCATTTTTGCTCACTCTTATCTCTCCAAGACGGTTGTTCCTGAGGGTTGGACGAATTGGAGCTATGATGGTCCCACAAAGAATCTGTATCATGCTGAGTACAAGTGCTATGGACCAGGAGCCACAAGAGAGGGAAGAGCTTCATGGTCAAGACAACTTAGTGATCAAGAAGTTGCTTCATTTTTGTCTGTTGATTACATAGATGGCAAGAATTGGTTGCCAGCGTGGCACTAA 1047 0.4078 MASSFHASSAIISSIIVSIIILICMPCSAFGFINEKEVIDAPLLTQKLGINRTIKVDINGNGDFKSVQAAIDSIPEGNSNWVIVHVRKGVYRERVHIPKTKRYIFMRGNGKGRTAIVWSQSSSDNIDSATFKVEARDFIAFGISFKNEAPTGIAYTSQNQSVAAFVAADKIAFYHCAFFSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRSIFEGCEIFVIDDKRVTIHGSITAQNRESEREISGFIFNKCRVYGIGGVYLGRAKGPYSRTIFAHSYLSKTVVPEGWTNWSYDGPTKNLYHAEYKCYGPGATREGRASWSRQLSDQEVASFLSVDYIDGKNWLPAWH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00995 348 Pfam Pectinesterase 55 340 IPR000070 GO:0030599|GO:0042545
Aip04g00995 348 Gene3D - 48 348 IPR012334 -
Aip04g00995 348 SUPERFAMILY Pectin lyase-like 50 346 IPR011050 -
Aip04g00995 348 ProSitePatterns Pectinesterase signature 2. 199 208 IPR033131 -
Aip04g00995 348 PANTHER PECTINESTERASE 67-RELATED 13 347 - -
Aip04g00995 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00995 Aip-Chr4 14058975 14062118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00995 51 344 Carbohydrate Esterase AT5G47500 38.816 2.56e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00995 - - mtr:MTR_2g033970 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00995 04 14058975 14062118 Aip04g00995 04 14058975 14062118 ECH