Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00993 ATGAATCTTTTTTCTCTATGTTGGAAGCCGTTCGGCCACGGCGGCGGTGATGCTGTCTCTGCCGCCGCCGGAAGGGAAGGCAAGGACGGCCTTCTCTGGTTCCGCGATGTCGGAAGGTACGGCTCCGGCGAATTCTCGATGGCCGTTGTCCAGGCCAACCAGGTCCTCGAGGATCAGAGCCAGATCGAGTCCGGTCCCCTCGGAACCTTCGTCGGCGTCTACGACGGCCACGGTGGCCCCGACGCCTCCCGCTATGTCTGCGATAACTTGTTCCGCAACTTTCAAGCTGCGTCAGCTGAGTCACAGGGGGTTGTGACGGCCGAGACTATTCAAACAGCGTTCCGGAGAACTGAGGAAGGGTTCACTGCTCTTGTTTCTGATCTGTGGAGTACTCGGCCTCAAGTTGCCACTACCGGGACATGCTGTCTGGTTGGAGTGATCTTCCAGCAGACGTTATTTGTGGCGAATCTAGGAGATTCCCGTGTTGTGTTGGGTAAGAAAGTTGGCAACACCGGTGGGGTCGCAGCGATTCAGCTATCTGCTGAACACAATGCGAATCTTGAGGCTGTTAGGCAGGAGCTTAAAGAATTGCACCCTGATGATCCCCAAATTGTTGTCCTTAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATGCGCAGTTTAACCGGGAACCAATTAATCCCAAATTCAGACTTCCTGAACCAATGAACATGCCTATCTTGTCTGCTAATCCAACTATTATTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGATTGATGAGAAAGCTCGTATATGGGTGCAGGGTAGTGCGAAGAGGCTAGTGAAGGCTGCACTACAGGAAGCAGCAAGAAAACGAGAAATGAGATATTCAGACCTGAGGAAGATAGACAAGAAGAGGCACCCTTCTCCACCCTCCACTATCCATTCGCAGCGCCCTCGATCACTGACTCACTCTTCCTAG 1038 0.5106 MNLFSLCWKPFGHGGGDAVSAAAGREGKDGLLWFRDVGRYGSGEFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDASRYVCDNLFRNFQAASAESQGVVTAETIQTAFRRTEEGFTALVSDLWSTRPQVATTGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSAEHNANLEAVRQELKELHPDDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINPKFRLPEPMNMPILSANPTIISHPLQPNDSFLIFASDGLWEHLIDEKARIWVQGSAKRLVKAALQEAARKREMRYSDLRKIDKKRHPSPPSTIHSQRPRSLTHSS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00993 345 SMART PP2C_4 31 304 IPR001932 -
Aip04g00993 345 CDD PP2Cc 45 309 IPR001932 -
Aip04g00993 345 SUPERFAMILY PP2C-like 53 305 IPR036457 -
Aip04g00993 345 ProSitePatterns PPM-type phosphatase domain signature. 70 78 IPR000222 GO:0043169
Aip04g00993 345 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 1 332 - -
Aip04g00993 345 PANTHER ALPHABET, ISOFORM E-RELATED 1 332 - -
Aip04g00993 345 MobiDBLite consensus disorder prediction 331 345 - -
Aip04g00993 345 Gene3D - 36 328 IPR036457 -
Aip04g00993 345 MobiDBLite consensus disorder prediction 314 345 - -
Aip04g00993 345 MobiDBLite consensus disorder prediction 314 329 - -
Aip04g00993 345 ProSiteProfiles PPM-type phosphatase domain profile. 41 345 IPR001932 -
Aip04g00993 345 Pfam Protein phosphatase 2C 67 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00993 Aip-Chr4 14008567 14011721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00993 1 288 PP2C-type Phosphatase Gene Family AT3G17090 71.380 1.63e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00993 K01102 - gmx:100811922 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00993 04 14008567 14011721 Aip04g00993 04 14008567 14011721 ECH
Aip01g02915 01 131113607 131116917 Aip04g00993 04 14008567 14011721 PCT