Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00991 ATGGTTTCAAGGGGGTATTTTAAGGTGCGTCCTGTTAGGGGACATCATCCTTTCTGGTTGACGTTGGAGGGAGAGCGCCGGTTCCCGACGTACTGGAACTTCGGTGCGGGGCCGTCGGTTTTGACAAAGGTTACTCAAGAGTTCTTGTCTTCAGAGGATCGGGATATCGCTAGTGTCCTATGGTATTTGTTTGGGGAGCGTCCTCTGAACCCTAGGGACGTTATGGGGAGACCCCGTGGCTTGCCGGACTTACCTTGGTGTCTGTTTTATTGTTTTGCTATTTTTATCCGTCTTGTCGAGTTAGGGACTTATGCCTTTTTCTTTCTTGTTTCAGTTGAAATGGCTGGCgatttgacgactttggcgagattgaaggctgccatggaccgggaggtgacttcggaggcttctccttctactcattcgtccagtcctgccgatgactctcgcgtcgtttctcaacagcttgcctcggccgaggttgggggcgtcgttcctaagacttcgggcccggtgacttcgggtggtgacgaagaggtggtcgtggtctcggcatctggtgcttctcagaagcagagtcggccggaggagGTCGGCCTCTTGGACCAGAAACTGTGCCAGTCTCAGTCTAAGGTAGTCAAGCTGAAGGAGCAGCTTGAGGCGTCTAAGACGGTGAGGGAGAAAGCCGTGAAGGCATCCGAGGATGCCCgggctgagcttctccgtcttttcgaggtgaagcgggtgaaggaagaaagggagcattccgacccatggcatccgacagagCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGTGCCCTCAATCATCGCTGCCACCGGAATCGGAACCACTCCCGCCAGCTTCTCCTCCATTTCCGTCTCCGTACGCGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCCGCAGCGTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGCGCATACGCACCGACGACGACGCTTCCGCCAAGGACGACGGGGTCTCCGTGGGACCCGCCGTGGGGTCTTCAGTGGGCCCCGGAGCTCCAGCAAGGCTCTGGGCCCTCCCGGCCAGGCCCGATTTCGGTCAAATTTAG 1152 0.4132 MVSRGYFKVRPVRGHHPFWLTLEGERRFPTYWNFGAGPSVLTKVTQEFLSSEDRDIASVLWYLFGERPLNPRDVMGRPRGLPDLPWCLFYCFAIFIRLVELGTYAFFFLVSVEMAGDLTTLARLKAAMDREVTSEASPSTHSSSPADDSRVVSQQLASAEVGGVVPKTSGPVTSGGDEEVVVVSASGASQKQSRPEEVGLLDQKLCQSQSKVVKLKEQLEASKTVREKAVKASEDARAELLRLFEVKRVKEEREHSDPWHPTELGHKSDGQTIEWLLRQAVPSIIAATGIGTTPASFSSISVSVRGGAGSLSSPSSTSAASSLDHKPLLAPTPFILGKRIRTDDDASAKDDGVSVGPAVGSSVGPGAPARLWALPARPDFGQI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00991 383 MobiDBLite consensus disorder prediction 133 152 - -
Aip04g00991 383 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 262 383 - -
Aip04g00991 383 MobiDBLite consensus disorder prediction 132 152 - -
Aip04g00991 383 Pfam TCP family transcription factor 263 318 IPR017887 -
Aip04g00991 383 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 262 383 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00991 Aip-Chr4 13907665 13916572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00991 263 383 TCP Transcription Factor Family AT5G23280 58.065 1.01e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip04g00991 TCP 2.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00991 K16221 - aip:110269354 176.407