Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00978 ATGATAGCTGCTATAGTTTTTAATACATCAGAGAGTTCATTGGATACTATGAATGAATGGCTCAATATGGTTCAGTCAATTCAGATTCCTTTTGTACTCATTCTACTTCTTACATTGGTGTCTAAAGAAGAGGTCATGGGAACTTTTAGAATAGGCCCTATTGTAGAGAATCTACCCCCAAATTTATTCCTCCACTCCTATCTCTCCGAGACAGCTGCATCTTACCGCAACTATGATGATAGCTGTCATGTTCTTCTTTCTGTGGTCGAAGGCGGGGACAGTGTCGTCGCCAACGTCGACGTTACCGGAGAAGATCGAGACAGAGGTAGAATCATAGGAGAATGA 345 0.4203 MIAAIVFNTSESSLDTMNEWLNMVQSIQIPFVLILLLTLVSKEEVMGTFRIGPIVENLPPNLFLHSYLSETAASYRNYDDSCHVLLSVVEGGDSVVANVDVTGEDRDRGRIIGE 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00978 114 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 1 58 - -
Aip04g00978 114 Pfam Natural resistance-associated macrophage protein 3 52 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip04g00978 114 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 58 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00978 Aip-Chr4 13784185 13786098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00978 1 58 Inorganic Solute Cotransporters AT1G47240 70.690 3.82e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00978 K21398 - lang:109356302 99.7525