Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00969 ATGTTGCATTTCAAGAAGGGCGAGGCAGTGGAGGCCACCCACCCTAAAAACCCAGACAACCGTAACCGTCTCTACCCTGCATCCGTTCTCCGCGCCACCAACAATAACCGCCTCCTCCTCCAGTACCACACTCTCTTCTCCGACCACCCTCCCAACAACCCCCTCCGCTATTCACTCCCCCTCTCTTGCGTCAGGCCCAAGCTTCCCGACCTCCTCAACCCCTGGTTCAAGGTTGGCGATCCCGTCGACGCATACTGCCACTCTCACGGCGGCGCTGCCTGGTGCTCCGCTACTGTCGACGATATCCTCGAGAACTCCAGGTATGCGGTGTCGTTTTGGGATGAGAAGGGGAATGTAAACACGGAGCGTGCGGTTATTGAACAATGCAGGATGCGCCCTCACCGTGAATGGGTCCATGGATACTGGGTCCCACCTCTTCCGTCTCAAATGGATAACAATATCCAATATACATCAAGCAAGCCAAAGAAACTCAAAGCTGACGAAACCTATAAGGAGCAGCCACCTGAGATGGTGTCGATGACGAATACAGGAAATTTAAGATTTAAGATCAAATATAGCAGGAGACCATTAAAAGAGTCAAAGTTTAAAAAAGGCAGAATGGTGGAAGTCAGGGATGAGGATGAAGGTTACAAAGGTGCTTGGTTCGTTGCTACTATTGTTAGCTCAGTAGGAAAAGACATGTTTCTTGTAGAATATAGGGACCTCTTAGCAGATGATGGAACTCATCAGCTCTTGCAAGAAGTCGTCTATGAAAAATTCATAAGGCCCTGTCCACCTGAAGTTCCCTCTGTTAGCTCTTTCAAACAGTTTCAAGAGGTTGATGCATGGTATAATGATGCTTGGTGGGAAGGCGTGGTTCTTGCAGTGGTAAATAGCAGCGAGTGTTTTGTTTCTTTCATGCACAACGATGTTTTGAGATTTGAAAGTTCCAAGCTAAGACCTCACCAAGACTGGTTTGATGGAAAATGGGTCATGGCATCTAAGGGGTCAAGAGAACTGACAAAGAAGTTTGGAGATGTGATGTCAAAAGCCAAGAATCTCACTGGTAATAAAATAATCTTGAAATGTCTGAAATCTCTCGAGCCAGAGCCGGAACAGATGCCAAGAATTCTAATGTCAGGGTCCAGGAACAGCAGCATTCAATTTGCATCGCATTTATATAAAGGTGCAAAGGTAGAAGTCAGGAGTGATGAAGAAGGTTACCAAGGTGCCTGGTACACTGCCATCATTGTTAACTCTTTACAGAACGGCAAGTATGTGGTGGAGTATCTCACCCTGAAAACTAACGACTTAACCGAACAACTGAGAGAGGAAGCAGATGCTTCAGATATCAGGCCAGTTCCACCAGACATTCAACATCGCCATCGCTATGTGCTGCGTGAATGGGTTGACGCTTGGTATAACGACGGATGGTGGAAAGGCCAGGTATGCGGTTTCGCTTGCTTCAGGTATAGTGTTTACTTTTGGCCTACAAAGGAGCAGCTGGAATTTGAACATTGTCATCTAAGGCCTCACCAAGAATGGATTGATGGAAGATGGGTACATGCTTGA 1572 0.4701 MLHFKKGEAVEATHPKNPDNRNRLYPASVLRATNNNRLLLQYHTLFSDHPPNNPLRYSLPLSCVRPKLPDLLNPWFKVGDPVDAYCHSHGGAAWCSATVDDILENSRYAVSFWDEKGNVNTERAVIEQCRMRPHREWVHGYWVPPLPSQMDNNIQYTSSKPKKLKADETYKEQPPEMVSMTNTGNLRFKIKYSRRPLKESKFKKGRMVEVRDEDEGYKGAWFVATIVSSVGKDMFLVEYRDLLADDGTHQLLQEVVYEKFIRPCPPEVPSVSSFKQFQEVDAWYNDAWWEGVVLAVVNSSECFVSFMHNDVLRFESSKLRPHQDWFDGKWVMASKGSRELTKKFGDVMSKAKNLTGNKIILKCLKSLEPEPEQMPRILMSGSRNSSIQFASHLYKGAKVEVRSDEEGYQGAWYTAIIVNSLQNGKYVVEYLTLKTNDLTEQLREEADASDIRPVPPDIQHRHRYVLREWVDAWYNDGWWKGQVCGFACFRYSVYFWPTKEQLEFEHCHLRPHQEWIDGRWVHA 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00969 523 Gene3D - 190 274 - -
Aip04g00969 523 Gene3D - 384 462 - -
Aip04g00969 523 SMART agenet_At_2 391 459 IPR014002 -
Aip04g00969 523 SMART agenet_At_2 462 517 IPR014002 -
Aip04g00969 523 SMART agenet_At_2 200 269 IPR014002 -
Aip04g00969 523 SMART agenet_At_2 2 72 IPR014002 -
Aip04g00969 523 SMART agenet_At_2 74 139 IPR014002 -
Aip04g00969 523 SMART agenet_At_2 272 327 IPR014002 -
Aip04g00969 523 Pfam Agenet domain 205 266 IPR008395 -
Aip04g00969 523 Pfam Agenet domain 396 456 IPR008395 -
Aip04g00969 523 Pfam Agenet domain 79 134 IPR008395 -
Aip04g00969 523 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 95 172 - -
Aip04g00969 523 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 3 113 - -
Aip04g00969 523 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 182 523 - -
Aip04g00969 523 MobiDBLite consensus disorder prediction 1 23 - -
Aip04g00969 523 MobiDBLite consensus disorder prediction 1 18 - -
Aip04g00969 523 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 95 172 - -
Aip04g00969 523 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 3 113 - -
Aip04g00969 523 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 182 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00969 Aip-Chr4 13503727 13507233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00969 402 515 PHD Transcription Factor Family AT5G58610 25.185 1.93e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00969 - - adu:107483399 1094.34