Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00958 ATGCAGAACAGGACGGTGGAGATGCATGCGTCGATAGCAGCACACACGAGCAAGGAGAGACGAATCAGGCGCATCTGGGAGAGGGAGAATCTTCTGGTCGTGTCCATTGATTTAGGGATTCGAGTTTTGAAGATGCTTCCGTCCACCTCGCCAAAGGGCTTTGAGAGGGAGAAAACGAAGGAGAGTGAGATCGAAACCCTACAATCCACCGCCACCGCCATCGCCACCGCCACCGTTGCCGCCACCGCCGCCACCATTCATCTCTGCCATTGTTGCCGTTATTGTCTCCTTCGTCGACACGTCACCGCTGGAGTTATGAATGAGGGACAAGGTGATCGTGGAGCCTCTCCTCTGCTTCTGCGTCGTCTTCCCCGGCAGGTTCTTCCGCTGGTTCTACTTTTGCTCCGGTGGCTTGAAGAACTCAGAGCGCAGTTTCGATGCGAACGCGGTGGCACTGGCGGAGCAGATCTAGAAGCTACTGCTTCTTTTGCTATGTCATTATATTGCTCTGATTGGGCCTGCTATGGTGTTTTGAGGTTTGTTATGGAAAATGGCGCCAAGGGATGTGAGGCCCTGCAACATATAAGACAGATTGCACAAGAATCTAGCAGAGAAATTCAGTATGGTGGCGGACGCCAGCCTACTGTGTTGAGGACATTTAGCCAGAGACTCTGCCGGGGGTTCAATGATGCTGTTAATGGGTTTGTGGAGGATGGTTGGTCACTGCTAGGCAATGATGGGGTAGAAGATGTGACTATAGCTATAAACTCATCTCCCAACAAATTTTTGGGGTCCCGGTACAATTCATCAATGTTCCCAGCTTTTGGAGGTTGGGTTCTGTGTGCCAAGGCATCCATGCTGTTGCAGAATGTTCCTCCGGCTTTGCTTGTTCGATTCTTGAGGGAGCATCAGTCTGAGTGGGCTGATTATGGTGTTGATGCATACTCTGCTGCATGTCTTAAGGCTACTCCTTATGCTGTTCCTTGTGCAAGACCTGGTGGTTTCCCAAGCACCCAGGTCATTTTACCACTTGCTCATACTATTGAGCATGAGGAGTTCTTGGAGGTAGTTCGCATAGAGGGTCATGCATTTTTCCCTGAAGATGTTGCATTGGCACGCGATATGTATTTGCTTCAGGTGAAGACAGTGGCTCGTATTGTGGAAGGTGATGCAGGGAAAGTAATTTGCAGGGAAGCAGAGAGGATCAAACATATGGCTGTAGTTCTGGGATCAAGAGGCAGAAGCTTAATTCAAAGTGTGCTACAGGAAAGTGTTGGAGAGTACTGCTTCCACCACTGCAAAGCAGCACCTGTTGTCATCGTTTCTGGAAAAGATGCTGGAGATGCATCAATATTGTAG 1359 0.4974 MQNRTVEMHASIAAHTSKERRIRRIWERENLLVVSIDLGIRVLKMLPSTSPKGFEREKTKESEIETLQSTATAIATATVAATAATIHLCHCCRYCLLRRHVTAGVMNEGQGDRGASPLLLRRLPRQVLPLVLLLLRWLEELRAQFRCERGGTGGADLEATASFAMSLYCSDWACYGVLRFVMENGAKGCEALQHIRQIAQESSREIQYGGGRQPTVLRTFSQRLCRGFNDAVNGFVEDGWSLLGNDGVEDVTIAINSSPNKFLGSRYNSSMFPAFGGWVLCAKASMLLQNVPPALLVRFLREHQSEWADYGVDAYSAACLKATPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEGHAFFPEDVALARDMYLLQVKTVARIVEGDAGKVICREAERIKHMAVVLGSRGRSLIQSVLQESVGEYCFHHCKAAPVVIVSGKDAGDASIL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00958 452 Gene3D HUPs 329 450 IPR014729 -
Aip04g00958 452 CDD USP_Like 311 441 - -
Aip04g00958 452 Pfam Universal stress protein family 379 441 IPR006016 -
Aip04g00958 452 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX32 190 382 - -
Aip04g00958 452 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 317 442 - -
Aip04g00958 452 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 190 382 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00958 Aip-Chr4 13122499 13127014 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00958 191 380 Homeobox Transcription Factor Family AT2G34710 77.895 2.29e-103 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00958 K09338 - aip:107637590 369.392