Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00953 ATGCTGCAATCATATGATACAGATGCACTTTTCCTAAAATGGTTGGAGGATTCTCATAGGAAACCATTCTTAGGGGCAGACCTTGCCTTGGCTGGTGAACGGAGTGTTAATAATACTTATGGGACAACGGCATTGACTGTGCTTATACTTGGAAGGCATTTATTGGTTGCCAATGTTGGTGATTGTCGAGCAGTTCTTTGTAGGCGAGGAGTAGCAGTTGAGATGTCTCATGATCACAGACCGAGTTATTTACCAGAACAGAGGAGAGTGGAAGAGTTAGGTGGTTTCATCTATGATGGGTATCTCAATGGTGATCTTTCTGTCACCCGTTCCCTTGGTAATTGGAAGTTGAAGTATCCATTTGAGACTGTGTTGCCTCGTATTGTTGTTCCAGATATTCAAGTAGTTACATTGACAGAGAAGGACGAGTTCTTGATTATTGGGTGCGACGGCATTTGGGATGTAATGTCAAGCCAGGAAGTAGTTAGGTTCGTGCATCGACAATTGATAAGGCATGATGATCCACAACAATGTACCAAAGAACTAGTTAAGGAAGCATTGCGCCTCAATACAACAGATAATCTTACTGTGATTGGTATATGCTTATCCCCGGTGGAAAAGATTGTTGAATCTCTCCCACCGCATAGGCGAAGATTCAGAGCTTGCTCCCTATCTAAAGAGGCCAGATTGAGGAGCTTACTTGAAGGAAAATAA 714 0.4272 MLQSYDTDALFLKWLEDSHRKPFLGADLALAGERSVNNTYGTTALTVLILGRHLLVANVGDCRAVLCRRGVAVEMSHDHRPSYLPEQRRVEELGGFIYDGYLNGDLSVTRSLGNWKLKYPFETVLPRIVVPDIQVVTLTEKDEFLIIGCDGIWDVMSSQEVVRFVHRQLIRHDDPQQCTKELVKEALRLNTTDNLTVIGICLSPVEKIVESLPPHRRRFRACSLSKEARLRSLLEGK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00953 237 Gene3D - 3 207 IPR036457 -
Aip04g00953 237 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 226 - -
Aip04g00953 237 Pfam Protein phosphatase 2C 14 194 IPR001932 -
Aip04g00953 237 SMART PP2C_4 3 200 IPR001932 -
Aip04g00953 237 ProSiteProfiles PPM-type phosphatase domain profile. 1 202 IPR001932 -
Aip04g00953 237 SUPERFAMILY PP2C-like 10 204 IPR036457 -
Aip04g00953 237 CDD PP2Cc 6 202 IPR001932 -
Aip04g00953 237 PANTHER PROTEIN PHOSPHATASE 2C 1 226 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00953 Aip-Chr4 12977649 12978362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00953 8 237 PP2C-type Phosphatase Gene Family AT1G48040 59.052 2.17e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00953 K14803 - gmx:100798957 365.155