Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00946 ATGGCTATGGAAGCTGCTGAGGCTTCAACCACACCACAGTTGGCGCTCGATGATACTGACATCAACTGGCACAGGCTGGACAAGACCAAGTTCCATGTAATTGGTGCCATTCTCTTCACTGCTCAATCAGCTTTGCTTCATCCAACAGCAGTGGTTAAGACAAGAATGCAAGTAGCTGGTTCTGGACTCTCTCAAATGCGTGGAATGTCGGTGTTCACTCATATTCTAAGGAGTGATGGTGTTCCCGGAATCTTTAGAGGTTTTGGCACTTCTGCTATTGGATCAATGCCTGGGAGGGTCCTAGCTTTGACGTCTCTAGAGATGTCGAAAGACATTATGATGAAATACACACAAGGTAGTGATATACCAGAAGCTTCAAGAATCGGCCTTGCGAATGGTGTGGCCGGCATGTTTTCCAATCTGGTGTCTTGTGTATACTTCGTGCCTTTGGATGTGATCTGCCAGAGGTTAATGGTACAAGGTCTTCCAGGAATGGCTCCTTGTCGAGGACCATTTGATGTTATACGTAAAGTTTTCGAGGCCGAGGGTTTCCGAGGCTTGTATAGAGGTTTTGGATTAACAGCCATAACTCAGTCACCGGCATCTGCACTTTGGTGGGGTTCATATGGTGCGGCGCAACACATAATTTGGAGGAGTTTGGGCTTCAAAGATGATGCAGAGAACAAACCTTCACATTTTCAAATGGTGACGGTTCAAGCTACAGCAGGGATGGTGGCCGGTGCGTGTTCTTCGGTTATCACTACTCCAATAGATACAGTAAAAACACGCCTTCAGGTTATGGACAACTACGGTTCTGGAAGACCATCGGTACTGAAGACAACAAAGACTCTCCTTAAAGAAGATGGCTGGTGGGGATTCTACCGGGGGTTTGGACCTCGATTTCTAAACATGTCACTTTATGGAACGACGATGATCGTTACTTATGAACTGATAAAGAGATTGTCAGTACAACCGAGTTTGAGGTCTGTAGCTTAA 996 0.4608 MAMEAAEASTTPQLALDDTDINWHRLDKTKFHVIGAILFTAQSALLHPTAVVKTRMQVAGSGLSQMRGMSVFTHILRSDGVPGIFRGFGTSAIGSMPGRVLALTSLEMSKDIMMKYTQGSDIPEASRIGLANGVAGMFSNLVSCVYFVPLDVICQRLMVQGLPGMAPCRGPFDVIRKVFEAEGFRGLYRGFGLTAITQSPASALWWGSYGAAQHIIWRSLGFKDDAENKPSHFQMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTTKTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQPSLRSVA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00946 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 215 IPR018108 -
Aip04g00946 331 PANTHER OS01G0329400 PROTEIN 1 324 - -
Aip04g00946 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 321 IPR018108 -
Aip04g00946 331 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 324 - -
Aip04g00946 331 Pfam Mitochondrial carrier protein 131 217 IPR018108 -
Aip04g00946 331 Pfam Mitochondrial carrier protein 34 116 IPR018108 -
Aip04g00946 331 Pfam Mitochondrial carrier protein 238 322 IPR018108 -
Aip04g00946 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 112 IPR018108 -
Aip04g00946 331 Gene3D Mitochondrial carrier domain 24 325 IPR023395 -
Aip04g00946 331 SUPERFAMILY Mitochondrial carrier 25 317 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00946 Aip-Chr4 12861445 12864293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00946 18 321 Chloroplast and Mitochondria Gene Families AT5G15640 50.654 5.10e-106 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00946 K15121 - gmx:112997745 573.933