Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00923 ATGAAAATTGATGCTAGAAGAAAGGCAGAGGCATCAAGCAATAGCCAATTTCTTGCAAACATGAGCCATGAATTGAGGACACCTATGGCTGCAATAATTGGGCTACTTGACATTCTTATGTCCAACGACTGTCTAACCAACGAACAGTGTGCAACGGTTACTCAGATAAGAAAATGCTCGATGGCACTACTCCGGCTTCTTAATAACATCCTGGATCTCAGCAAGGTTCTTTTGTCAATTTGCTCATTGTTGACGGATCCCAACCCTGATGATCCTCTTGTCCCTGAAATTGCGGACATGTACAAGACTGACAGGGCTAAGTATGAAGCTACTGCACGCAGCTGA 345 0.4406 MKIDARRKAEASSNSQFLANMSHELRTPMAAIIGLLDILMSNDCLTNEQCATVTQIRKCSMALLRLLNNILDLSKVLLSICSLLTDPNPDDPLVPEIADMYKTDRAKYEATARS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00923 114 PANTHER OSMOSENSOR HISTIDINE KINASE 3 76 - -
Aip04g00923 114 CDD HisKA 15 75 IPR003661 GO:0000155|GO:0007165
Aip04g00923 114 Pfam Ubiquitin-conjugating enzyme 70 113 IPR000608 -
Aip04g00923 114 Gene3D - 2 76 - -
Aip04g00923 114 SMART HisKA_10 13 79 IPR003661 GO:0000155|GO:0007165
Aip04g00923 114 SUPERFAMILY UBC-like 70 113 IPR016135 -
Aip04g00923 114 Pfam His Kinase A (phospho-acceptor) domain 13 75 IPR003661 GO:0000155|GO:0007165
Aip04g00923 114 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 114 IPR000608 -
Aip04g00923 114 PANTHER TWO-COMPONENT HISTIDINE KINASE 3 76 - -
Aip04g00923 114 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 11 75 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00923 Aip-Chr4 12325153 12326893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00923 2 76 Histidine Kinase Gene Family AT2G17820 85.714 4.93e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00923 - - aip:107638907 144.821