Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00920 ATGGTGGCTGTGAGTGAGATTCGCAAGGTTCAAAGGGCAGAAGGCCCTGCAACTGTATTGGCGATTGGCACAGCAAATCCATCAAATTGTGTTGATCAGAGTACATATGCAGATTATTATTTTAGAGTAACCAATAGCGAACACATGACCGATCTCAAGAAGAAGTTTCAACGCATTTGTATGCCAGATCTTTCAGCTCCGGAGAGCTTGCAACTGTATCTGGATACAAAGTTTGAGCAGCTGAAAATTGCAACAGAACTCGAACTTTGGTAG 273 0.4286 MVAVSEIRKVQRAEGPATVLAIGTANPSNCVDQSTYADYYFRVTNSEHMTDLKKKFQRICMPDLSAPESLQLYLDTKFEQLKIATELELW 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00920 90 Gene3D - 1 86 IPR016039 GO:0016746
Aip04g00920 90 SUPERFAMILY Thiolase-like 1 61 IPR016039 GO:0016746
Aip04g00920 90 PANTHER CHALCONE SYNTHASE 2 2 61 - -
Aip04g00920 90 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 2 61 IPR011141 GO:0009058|GO:0016747
Aip04g00920 90 Pfam Chalcone and stilbene synthases, N-terminal domain 5 61 IPR001099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00920 Aip-Chr4 12275785 12276454 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00920 48 90 Eukaryotic Initiation Factors Gene Family AT4G11420 65.116 5.61e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00920 K00660 - aip:107636078 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00920 04 12275785 12276454 Aip04g00920 04 12275785 12276454 ECH