Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00910 AGAAGTACCAAGGCTTGGAAAAGAGGCTACAACTAAGGGCATCAAAGAATGGGGGCCAGCCAAAGTCTAAGATCACACATTTGATCCTCTGCACCACCAGTGGTGTTGCGTTACCTGGTGTTGATTACGAACTTATCGTACTCTTAGGCCTCGACCCATGCGTCAAGAGATACATGATGTACCACCAAGGCTGTTTCACCGGTGGCATGGTCCTTCGTTTGGCTAAGGACTTGGCCGAAAACAACAAGGATGCCCGTGTGCTTATTGTTTGTTCTGAGAATACATCAATTATTTTTCATGGTCCTAGTGAGACAGACATAGATAGTCTTGTAGCGCAAGCATTGTTTTCTGATGGAGCTGCTGCGATTATCATTGGTTCTGATCATGTTCCACAGGTTGAGAAGCCTATCTTTGAGCTTGTTTCAACTGATCAAAAACTTATCCCTAATAGCCAAGGAGCCATCGGTGGTCTCCTTCGTGAAGTCGAGCTTACATTCTATCTTAATAAAAGTGTTCCTAATATTATTTCACAAAACATCAACGACGCACTTAGTAAAGCTTTTGATCCATTGGGTATATCTGATTATAACTCAATATTTTGGATTGCACACCCTGGTGGACGTGCAATTCTGGACCAGATTGAACAAAAAGTGAACTTAAAGCCAGAGAAGATGAAAGCCACTAGAGATCGCCTCCCTCCCTCTATTCGTAGAGTCGTAGACCGTAGCGCGTCCTTCCCTCCTCCTCCATCCACGGCGCCCTTCTCCTTCCCCACCATCCTTCTCACGCAATCCGTAGTGGTGGCGCGTTCCATGTCACCAAGAAGACTACGCTGTCACCAAGCACCTCTCCGTTGCTGTCACCGAACAGATCTCTCCGTCGCCAAGAACCCCACGAAGTTGCTAGCTGAGAACAGCATCCACAACCTCTTAATTCTCGAAGCTTCCGACCGAATCGGCGGTAGAATCCCGCAAGAAGGTGAAGGATGGGAGAATCATGAAGTCGGTGATGAAGTCCATGTTCACTATACAGGGACTCTGCTTGATGGCACCAAGTTTAATTCCAACAGAGATAGGGGAACCCCTTTCACGTTCACACTTGGACAAGGGCAAGTAATTAAAGGATGGGATCAAGGTATTAGAAGCATGAAGAAAGGTGAAAATGCCTTTTCAACCATCCCACCTGAGCTAGCTTATGGTGAATCCGGTTCTCCTCCAACAATTCTGCCCAAAGCAACTCTTCAATTTGAGATTCAACcaagACTCACATTAAGGAACAACCCAACTCAGAACACAATCCCAATTCAGAATCTAGTACAAAAAATCAACTCAGAAGCCAGAATCTTAGAAATTAAAACTAAAGAAGCAGCGGCTTACTGGAGACACGGCGAGGGAGGAATGACGGTGGTGACAGTGACGTTCGGCGACGAGGAGGCGGGCTCGGCCGGTGGTGGTCGCGGCTACTGTGGTTGGTTGTGGGTGGCAATAGTGGCCTTGGTGGGTGAAAGGAGGCTGGCGCCGAATGCTCAGATTAGTGTGAAGGACATATGTAAAGATGGTGGTTTGTTTAAGAAGATACTTGTTAAGGGAGAGAAATGGGAGAACCCTAAGGATCCTGATGAAGTTCTAGTAAAGAGAAGTTTGGGGACGGCAGTTGTGATCTACATAGACAGTGATGAAGATGAGTGTAATTCACAGCGAACATTGCAGAGGAAGACAGTAAGCCAAAGGTTATGCCGGATAATGAGATTCCGAGTTCTTAAGTTGCTGTCAAGCGAAAGCAGCATCCAAGTGCTTCTATAA 1802 0.4634 KYQGLEKRLQLRASKNGGQPKSKITHLILCTTSGVALPGVDYELIVLLGLDPCVKRYMMYHQGCFTGGMVLRLAKDLAENNKDARVLIVCSENTSIIFHGPSETDIDSLVAQALFSDGAAAIIIGSDHVPQVEKPIFELVSTDQKLIPNSQGAIGGLLREVELTFYLNKSVPNIISQNINDALSKAFDPLGISDYNSIFWIAHPGGRAILDQIEQKVNLKPEKMKATRDRLPPSIRRVVDRSASFPPPPSTAPFSFPTILLTQSVVVARSMSPRRLRCHQAPLRCCHRTDLSVAKNPTKLLAENSIHNLLILEASDRIGGRIPQEGEGWENHEVGDEVHVHYTGTLLDGTKFNSNRDRGTPFTFTLGQGQVIKGWDQGIRSMKKGENAFSTIPPELAYGESGSPPTILPKATLQFEIQPRLTLRNNPTQNTIPIQNLVQKINSEARILEIKTKEAAAYWRHGEGGMTVVTVTFGDEEAGSAGGGRGYCGWLWVAIVALVGERRLAPNAQISVKDICKDGGLFKKILVKGEKWENPKDPDEVLVKRSLGTAVVIYIDSDEDECNSQRTLQRKTVSQRLCRIMRFRVLKLLSSESSIQVLL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00910 599 Gene3D - 136 232 IPR016039 GO:0016746
Aip04g00910 599 SUPERFAMILY Thiolase-like 15 132 IPR016039 GO:0016746
Aip04g00910 599 SUPERFAMILY Thiolase-like 135 231 IPR016039 GO:0016746
Aip04g00910 599 PANTHER CHALCONE SYNTHASE 7 7 231 - -
Aip04g00910 599 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 7 231 IPR011141 GO:0009058|GO:0016747
Aip04g00910 599 Pfam Chalcone and stilbene synthases, N-terminal domain 10 127 IPR001099 -
Aip04g00910 599 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 332 418 IPR001179 GO:0003755
Aip04g00910 599 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 335 418 IPR001179 GO:0003755
Aip04g00910 599 Pfam Chalcone and stilbene synthases, C-terminal domain 138 231 IPR012328 -
Aip04g00910 599 Gene3D - 315 420 IPR046357 GO:0003755
Aip04g00910 599 SUPERFAMILY FKBP-like 321 418 - -
Aip04g00910 599 CDD CHS_like 12 231 - -
Aip04g00910 599 Gene3D - 8 135 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00910 Aip-Chr4 12175504 12180940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00910 511 544 Calmodulin-binding Proteins AT5G48570 76.471 9.29e-09 56.2