Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00908 ATGCTCCATCGACGGCGCTATCAGCCTTGCACCGCCGTCGCACCGAACTTCCATTGCACTGAACTTCCATCGCACCGAGGCTCTATCGTACCCCTTCCTGTGTCTCAGCGATTGAAGACTAGTGTCCATGTTAACTTGGTCTTCCATATGGGACTGAGAATCAAGATGTTATTGATGCCGCAATTGTTGGCAAGAGCTGGAATCAAGGAGGTCTATTTTTTCCCTTTCAATCCTGGAGACAAGAGGACTGCTCTAACTTACATTGAATCTGATGGAAATTGGCATAGATCTAGCAAAGATATTGAACCTCTGCAACTGCAAAGAGGATGTGAGGAGAAAGGCTATGCAACTATTGTTAAGTTTGCTGACCGTGGGCTCCGATCTTTGGGGGTTGCTAGACAGGTTTGA 408 0.4706 MLHRRRYQPCTAVAPNFHCTELPSHRGSIVPLPVSQRLKTSVHVNLVFHMGLRIKMLLMPQLLARAGIKEVYFFPFNPGDKRTALTYIESDGNWHRSSKDIEPLQLQRGCEEKGYATIVKFADRGLRSLGVARQV 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00908 135 PANTHER CALCIUM-TRANSPORTING ATPASE 56 134 - -
Aip04g00908 135 PANTHER PLASMA MEMBRANE ATPASE 56 134 - -
Aip04g00908 135 Gene3D - 53 135 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00908 Aip-Chr4 12149839 12150868 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00908 54 134 Primary Pumps ATPases AT2G24520 57.471 1.44e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00908 K01535 - jre:109008616 95.5153