Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00904 ATGGGAGTAGACGCGACGAGAGCGGCGGCGGAGGGATCTCGTGCGATGCAAGGGATGACAGAGAGAGATTGTGCGATGCAAGCGGTGGCGGCAGCGATAGCGGCAACGGCTGCGGCGGAAGAAGCAGAAGTAGCAGCCATGGAGAGAAGAAGTAGCTCGTGTCAGGGAGAGAGGAAGAAGCTTGTGTTTGATTTGGGAATGGAGCTCGAAACACAATTTGAATGGGGGCTGCCACGGGGAGAGAGAGGGGATAGGACTGAGAATCAAGATGCTATATATGCCGCAATTGTTGGTATGCTTGCTGATCCAAAGGAGGCAAAGGCTGGAATCAGGGAGGTCCATTTTTTCCCTTTCAATCATGGAGACAAGAGGACTGCTCTAACTTACATTGAATCTGATGGAAATTGGCATAGATCCAGCAAAGGTGCTCCTGAGCAGATATTGAACCTCTGCAACTGCAAAGAGGATGTGAGGAGAAAGGCTATGCAACTATTGTTAAGTTTGCTGACCGTGGGATCCGATCTTTGGGGGTTGCTAGACAGGTTTGACAAAAAAGGATATTAA 564 0.4982 MGVDATRAAAEGSRAMQGMTERDCAMQAVAAAIAATAAAEEAEVAAMERRSSSCQGERKKLVFDLGMELETQFEWGLPRGERGDRTENQDAIYAAIVGMLADPKEAKAGIREVHFFPFNHGDKRTALTYIESDGNWHRSSKGAPEQILNLCNCKEDVRRKAMQLLLSLLTVGSDLWGLLDRFDKKGY 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00904 187 PANTHER PLASMA MEMBRANE ATPASE 82 163 - -
Aip04g00904 187 Pfam Cation transport ATPase (P-type) 83 152 - -
Aip04g00904 187 Gene3D - 79 172 IPR023299 GO:0000166
Aip04g00904 187 PANTHER CALCIUM-TRANSPORTING ATPASE 82 163 - -
Aip04g00904 187 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 90 165 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00904 Aip-Chr4 12118396 12125625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00904 82 186 Primary Pumps ATPases AT2G24520 68.571 1.81e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00904 K01535 K14618 ahf:112754217 171.785