Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00874 ATGATGATGGAGATAGGAGTGGTGGTGGTGGTGGTGGCCATTGTAGTAGTAGTAGTATTAATGGTTATGAAGAATGTGAATTGGTGGCTGTATGAATCCAAATTGGGGGAAAAGCAGTACTCTCTGCCACCAGGTGACATGGGATGGCCCTTCATTGGCAATATGTGGTCCTTCCTCAGAGCTTTCAAGTCCTCTGATCCTGATTCCTTCCTCTCTGCTTTTGTCTCCAGATTTGGAAAAACTGGAATGTACAAGGCTTTGATGTTTGGGAACCCAAGTGTGATTGTGACAACACCAGAAACATGCAAAAGGGTGTTAACAGATGATGAAAAATTCAAACCAGGTTGGCCTAGATCAACCATTGAGCTTGTTGGCAAGAAGTCATTCATTTCCATGGCGTACGAAGAACACAAGCGCCTCCGGCGTCTGACATCTTCGTCCATCAATGGCATGGAGGCGCTGTCGCTTTACTTGACATACATTGAAAAAAATGTGATAAGTTCTTTGGAGAAATGGACCAAAATGGGACAAATTGAGTTCTTAACTGAGATAAGGAAGCTTACATTTAAGATCATAATGCATATTTTCCTAAGCAATGAAAGTGAACCTATTATGGAAGCATTGGAAAGGGAATACACTGCTCTTAACTATGGAATTAGAGCCATGAAGATTAATATTCCTGGATTTGCATACCATAAAGCATTCAAGGCTAGAAAAAATCTATTGTCTGTATTTCAATCTATTGTGGATGAGAGAAGGAAATTAAGGAAGGAATATTCGCCTATGAAAGCCAAGGATATGATGGATTCTCTGCTAGATGCTGAAGATGACAATGGAAGAAAGTTGAGTGATGAAGAAATCATTGATGTCATGCTGATGTACTTGAATGCTGGCCATGAATCTTCAGGACATATTACTATGTGGGCAACCTATTTCCTCCAAAAGCACCCTGAATATTTCCAAAAGGCTAAGGAAGAGCAAGAGGAAATCATAAGGAGAAGACCTTCTACACAGAAAGGGTTGACACTGAAGGAAATTAGACAGATGGATTTTCTCTACAAGGTGATTGATGAAACAATGCGTGTGATTACATTCTCACTGGTGGTTTTTAGGGAGGCGAAATCCGATGTCGTTATGAATGGTTACACCATTCCAAAAGGTTGGAAAGCTCTTGTGTGGTTCAGATCAGTTCATCTTGATCCTGAGATATATCCTAATCCAAAGGAATTTAATCCCCACAGATGGGATAATAATGAACATAAGGCTGGAGAATTCCTTCCCTTTGGAGGAGGAAGTAGACTCTGTCCTGGGAATGATCTTGCTAAGATGGAAATAGCAGTTTTTCTTCACCATTTCCTTCTTAATTACCAATTTGAACAGCTTAATCCTAAATGCCCTGTGAGATACCTACCTCATACAAGGCCAATGGACAATTGCTTGGGAAGGTTAAAGAAACGTTCAACATCAACCTAA 1473 0.4039 MMMEIGVVVVVVAIVVVVVLMVMKNVNWWLYESKLGEKQYSLPPGDMGWPFIGNMWSFLRAFKSSDPDSFLSAFVSRFGKTGMYKALMFGNPSVIVTTPETCKRVLTDDEKFKPGWPRSTIELVGKKSFISMAYEEHKRLRRLTSSSINGMEALSLYLTYIEKNVISSLEKWTKMGQIEFLTEIRKLTFKIIMHIFLSNESEPIMEALEREYTALNYGIRAMKINIPGFAYHKAFKARKNLLSVFQSIVDERRKLRKEYSPMKAKDMMDSLLDAEDDNGRKLSDEEIIDVMLMYLNAGHESSGHITMWATYFLQKHPEYFQKAKEEQEEIIRRRPSTQKGLTLKEIRQMDFLYKVIDETMRVITFSLVVFREAKSDVVMNGYTIPKGWKALVWFRSVHLDPEIYPNPKEFNPHRWDNNEHKAGEFLPFGGGSRLCPGNDLAKMEIAVFLHHFLLNYQFEQLNPKCPVRYLPHTRPMDNCLGRLKKRSTST 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00874 490 SUPERFAMILY Cytochrome P450 39 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00874 490 Pfam Cytochrome P450 43 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00874 490 PANTHER CYTOCHROME P450 26 13 485 - -
Aip04g00874 490 PANTHER ENT-KAURENOIC ACID OXIDASE 2 13 485 - -
Aip04g00874 490 Gene3D Cytochrome P450 32 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00874 490 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00874 490 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00874 490 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00874 490 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00874 490 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00874 490 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00874 490 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00874 490 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00874 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00874 Aip-Chr4 11595039 11601565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00874 22 483 Cytochrome P450 AT1G05160 67.819 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00874 K04123 - gmx:100781238 860.522