Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00867 ATGTCCATAAAGGAGGATGATGTTAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCAAATGCAGAAGATGATGCTGATGACGACGATGTGGATTCGCTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACCTGGACTTTAGGACTGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAACTCGGCTTAGGGTAAAGCTTGACTACGGCTGCAGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACACCACCCCAATTTGTGCATCTGGTACCGGCCAATCGTCGTCTAACTGTCACTGATAGAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGAGCTGCCACATTATGGGGTATATTGCATTCCAAAAGGGTGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCGATCGCTATCGTCGGGCAAAAGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGACAAGTCAAACAACGATCCGATGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCCGACGAGACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTAGAAGCGATGGGTGGGAAAAGTCCAAAAGCAGTAATAACTGACCGAGACCTTGCCATGCGAAATGCAATCAAGAATATTCTGCCTGATGCGACCCATCGGTTATGCGGATGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTGCGCGATTTTAAGGGTCTTATATACGACAACAACGACCACAGAGACTTTGATTGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGCAGTACCTGGATAGAAAAGATGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGTGAAGGTATAAATTCTCTCATCAGATTCTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAATTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCAGTGATGATTACCTCGTTGGAGGTATATGAAAGATCTGCATCATGTTATTACACGCGAAACATTTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAATGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTCTCGGAGACCCGGCCAGAGATTGA 1689 0.4292 MSIKEDDVKNDSDNDLGDDFDYQPNAEDDADDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLDFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLTRTKCPTRLRVKLDYGCSRWKVSCFVESHNHDLTPPQFVHLVPANRRLTVTDRVQVENLHNFGVKSCHIMGYIAFQKGGYRHAGFTRKDLYNHIDRYRRAKVKNGDANAAINYLIDKSNNDPMFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTETYKWLLETFVEAMGGKSPKAVITDRDLAMRNAIKNILPDATHRLCGWHLQRNACENIKNPNFLRDFKGLIYDNNDHRDFDWRWAAILDKHNLVGSTWIEKMYETREMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQCSEPVMITSLEVYERSASCYYTRNIFKEIRNEIQRAGALNIMVLSTTLDKVEFSVTALGDPARD 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00867 562 PANTHER OS02G0262500 PROTEIN 60 541 - -
Aip04g00867 562 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Aip04g00867 562 MobiDBLite consensus disorder prediction 12 39 - -
Aip04g00867 562 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 541 IPR031052 GO:0006355
Aip04g00867 562 Pfam MULE transposase domain 286 380 IPR018289 -
Aip04g00867 562 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00867 Aip-Chr4 11471252 11472940 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g00867 MULE 3.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00867 - - adu:107460934 1092.41