Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00852 ATGCAAATGGACACCCTAATCTTTATTCAGGCACAACCCTTTGCCTCACTTGTGGTAGCTGCTGTCTCGCTTCTCCTCTTTATTTATCTAATAAACCGTAACCGCACCCCGGCAGCTGCCTCACTTGTGGTTGGTCTTGCTTCTTCTCTTCCTAAAGTAACAGTGGTTCCGGGTTTACCGTTTGTTGGAAATTTGCTGCAATTGAAGGATAAGAAGCCGCACAAGACATTCGCACAGTTTGCCCAGAAATATGGTCCCATATATTCCATCAGGACAGGTGCTTCCACCATTATCGTTCTCAACTCTGCCCATCTTGCCAAGGAGGCCATGATTACCAGATATTCATCGATTTCATCAAGGAAGCTGTCAAATGCATTAACAATTCTGACTTCCAATAAATGTATGGTTGCTATAAGTGACTACAATGACTTTCACAAAATGGTCAAAAAACTTATTCTTGCAAATGTTCTCGGACCCAATGCACAGAAGCGGCATCGTCTCCACAGAGAAGAAATGGTGGAAAACATGTCGAGGCAGTTTAATGAACATGTGAAGAACTCCTCTGATTCCCCAATTAATTTTAGGGATATATTTTCTTCTCAACTTTTTGGATTGGCAATGAAGCAAGGTGTAGGAAGTGATGTGGAATCCATTTATGTGGATGATTTTGGAAATAAAATATCAAGGAAGGACATGTATCAAATTCTAGTGGTTGACATAATGGAGGGTGCAATTGAGGTTGATTGGCGAGATTTCTTCCCATACTTGAGATGGATTCCAAATAGGAGCATGGAGACAAAAATTCAGAGAATGTGCTTCCGCAGGAAAGCAGTTATGAAAGCATTAATCAATGAGCAGAAGAAGAGAATTGCTTCGGGAAAGAAAGTGAATTGTTACATTGACTACCTGTTATCGGAAGCGAAGGAGCTAACCGAAGACCAAATCATGATGCTTCTTTGGGAGACCATCATAGAGACTTCGGATACTACATTAGTTACGTCCGAATGGGCTATGTATGAACTTGCTAAAGACAAAACACGTCAGGATCGACTGTATTCGGAGCTCCAAGATGCATGCGGGAATGAGAGGGTAACAGAAGACCATTTGGCTAAGCTGCCGTATTTAGGGGCTGTATTCCATGAAACTTTGAGGAAGCACAGTCCAGCTCCCATTGTCCCATTAAGGCATGTTGATGAAGATACTCAAATAGGAGGATATCACATTCCGGCTGGGAGCGAGATTGCTATAAACATATACGGGTGTAACATGGACGAGGAAGTGTGGGAAAATCCTGAGCAGTGGATGCCGGAGAGGTTTCTGGATGATGAGAAGTATGAGAGCATGGATCTGTACAAGACAATTGCATTTGGGGCGGGGAAGAGGGTGTGCGCAGGGGCTCTGCAGGCGAATCTGATAGCATGCTCGTCAATTGGGAGACTGGTTCAGGAATTTGAATGGGAGCTGGCTCAAGGTGAAGAGGAGAATGTTGACACAGTCGGCCTTACCACCCACAGGATGCATCCCCTCCTTGTCAAAATCAAGCCAAGAAGCAAATGA 1557 0.4387 MQMDTLIFIQAQPFASLVVAAVSLLLFIYLINRNRTPAAASLVVGLASSLPKVTVVPGLPFVGNLLQLKDKKPHKTFAQFAQKYGPIYSIRTGASTIIVLNSAHLAKEAMITRYSSISSRKLSNALTILTSNKCMVAISDYNDFHKMVKKLILANVLGPNAQKRHRLHREEMVENMSRQFNEHVKNSSDSPINFRDIFSSQLFGLAMKQGVGSDVESIYVDDFGNKISRKDMYQILVVDIMEGAIEVDWRDFFPYLRWIPNRSMETKIQRMCFRRKAVMKALINEQKKRIASGKKVNCYIDYLLSEAKELTEDQIMMLLWETIIETSDTTLVTSEWAMYELAKDKTRQDRLYSELQDACGNERVTEDHLAKLPYLGAVFHETLRKHSPAPIVPLRHVDEDTQIGGYHIPAGSEIAINIYGCNMDEEVWENPEQWMPERFLDDEKYESMDLYKTIAFGAGKRVCAGALQANLIACSSIGRLVQEFEWELAQGEEENVDTVGLTTHRMHPLLVKIKPRSK 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00852 518 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 14 517 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Aip04g00852 518 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 Pfam Cytochrome P450 57 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 Gene3D Cytochrome P450 49 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 SUPERFAMILY Cytochrome P450 57 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g00852 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00852 Aip-Chr4 11281554 11285516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00852 48 516 Cytochrome P450 AT5G25900 62.473 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00852 K04122 - gmx:100802970 753.051