Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00849 ATGGCACAACCTGGGTGTGATTTAACGTGTGGAGATGTTGAGATCCCTTACCCATTTGGAATGAAGGATCCAAAATGCTATGCAGAGGAGTGGTTCCAAATAGAATGCAAGAGTAACCACACACCATACCTCAAGCTTATAAACCTTGAAGTGACAGCCATTGACGTTAACATTAGCACCGTTGAAGTCAAGAATCCAGTTTTCCATAGGAAGTGTCACGATGGAGGCAGAGATTCTTCTCTCTCTCGTCCCAAACCAACCATAGAAGATCCTGCAGGTATTTCTTTGAGAGGTAGCCCCTTTGTGTATTCCAACAAGCGCAACACATTCGTAGCTTTCGGTTGCAACATTCTTGGATTCTTGCACTCTAACCGTTCAGTAGTCGCCGGCTGCGTGTCAGTTTGCGGTCCAAAAGAGTTCACAAGACTCAAGAAATTGGTTGCCAGTGGAAAAAAGGTTAATCTTGGTTGCCATGGAAAGTTCTGTTGTGTTGCTTCAATACCAAGTCATCTATCAGAGTACGAGGTGACAATGGAAGATATAAGAAATGGAAGCATTGCTCCTGGGTGCGACGACTATGCGCTGATAGCAAAAAAATGGAGAGAGGAATTAACATGGATGGTGAATCAGAAAGAGAGTGAACTCAAGAAGAATGTGAGTCACTATGCACATGCTGTGCTGGAGTTTGAGATTCTGAATTGGATCAACATTGAAGCAACTAATGCAGAATGTCTTAAGACTAATGTGACGTCCTCAAAAATGGAGCACTCAGGTTGGAGATGCAAATGCAGAGTAGGATTCCATGGGAACCCATACATTGCTGGTGGCTGTGTAGGACTTTTGTCAAGCCTCGGATCCATTATTTTATTGCTGGGTCTAAGGTGGCTCTATGAAGTTGAAAGGAAAAGAATAGCGAAAAAAAGCAGAGAAAGTTTCTTCAAAAAGAATGGTGGTGTGTTGTTAGAAAAGGTATTGTCTTCTAGTGAAGGTAGTTTTGATAAATTTAAACTTTTCAGCTTAAAGGAATTAGAGAAGGCCACAAACCACTTTAATGTGAACCGGATACTTGGAAATGGAGGTGAAGGTACTGTTTACAAGGGCATGCTACTAGATGGTAAAATTGTGGCTGTCAAGAAGTTTAAGGTCCAAGGAAAGATAGAACAATTCATCAATGAATTTGCTATTCTTTCGCAAATTGACCACAGAAATGTGGTTAAACTGTTGGGGTGTTGTTTGGAAACAGAGATTCCTCTGCTTGTTTATGAATTCATTCCCAATGGGACCCTTTTCCAATATTTGCATGACCAAGATGCATATCTACCAATGACATGGGAAATGCGTTTAAAGATTGCCATTGAAGTTGCAGGAGCTCTATTCTATTTACATTCAGCGGCTTCTAAGCCCATTTATCATAGAGATATTAAATCGACCAATATATTATTGGATGAAAAGTACAATGCAAAGGTGGCTGATTTTGGAACATCCAAAATGATTGCTATTGAAGACACACACCTCACCACATTAGTTAAAGGAACTTTCGGATACTTGGATCCTGAATATTTTCACACTAGTCAATTTACAGACAAGAGTGATGTTTATAGTTTCGGAGTAGTTCTTGTTGAACTTTTAACAGGGCAAAAGCCGGTTTCCTTTGTTGCCCCGGATGAGGCGCAAAATTTAGCATCATACTTTATTTTGTGCATGGAGGAAAAACGTGTGTTTGACATCATTGACAAAAGAATCATGTGGGAAGGAAGGAGAAAGCATATCAATGCAGTTGCCAAGCTTGCCAAAAGATGTTTAGACCTGAAAGGTATTAAGCGGCCTAGTATGAAGGAAGTCTCAATGCAATTATATGGTATCTGGGAGTTGCAAAGGAATTCTAGAGCATAA 1893 0.4041 MAQPGCDLTCGDVEIPYPFGMKDPKCYAEEWFQIECKSNHTPYLKLINLEVTAIDVNISTVEVKNPVFHRKCHDGGRDSSLSRPKPTIEDPAGISLRGSPFVYSNKRNTFVAFGCNILGFLHSNRSVVAGCVSVCGPKEFTRLKKLVASGKKVNLGCHGKFCCVASIPSHLSEYEVTMEDIRNGSIAPGCDDYALIAKKWREELTWMVNQKESELKKNVSHYAHAVLEFEILNWINIEATNAECLKTNVTSSKMEHSGWRCKCRVGFHGNPYIAGGCVGLLSSLGSIILLLGLRWLYEVERKRIAKKSRESFFKKNGGVLLEKVLSSSEGSFDKFKLFSLKELEKATNHFNVNRILGNGGEGTVYKGMLLDGKIVAVKKFKVQGKIEQFINEFAILSQIDHRNVVKLLGCCLETEIPLLVYEFIPNGTLFQYLHDQDAYLPMTWEMRLKIAIEVAGALFYLHSAASKPIYHRDIKSTNILLDEKYNAKVADFGTSKMIAIEDTHLTTLVKGTFGYLDPEYFHTSQFTDKSDVYSFGVVLVELLTGQKPVSFVAPDEAQNLASYFILCMEEKRVFDIIDKRIMWEGRRKHINAVAKLAKRCLDLKGIKRPSMKEVSMQLYGIWELQRNSRA 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00849 630 Pfam Protein kinase domain 351 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00849 630 CDD STKc_IRAK 356 614 - -
Aip04g00849 630 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 2 623 - -
Aip04g00849 630 ProSiteProfiles Protein kinase domain profile. 350 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00849 630 SUPERFAMILY Protein kinase-like (PK-like) 332 619 IPR011009 -
Aip04g00849 630 Pfam Wall-associated receptor kinase galacturonan-binding 6 64 IPR025287 GO:0030247
Aip04g00849 630 Gene3D Transferase(Phosphotransferase) domain 1 424 629 - -
Aip04g00849 630 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 623 IPR045274 GO:0007166
Aip04g00849 630 Gene3D Phosphorylase Kinase; domain 1 322 423 - -
Aip04g00849 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Aip04g00849 630 SMART serkin_6 350 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00849 Aip-Chr4 11247265 11250777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00849 6 621 Receptor kinase-like Gene Family AT1G69730 42.297 2.84e-176 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aip04g00849 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00849 - - aprc:113852217 705.286