Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00846 ATGACATGGGATATGCGTTTGAGAATTGCATCTGAGATTGCAGGAGATTTGTTTTACTTACATTCAGCTGCTTCTCAACCAATTTATCACAGAGATGTAAAGTCAACAAATATTTTGTTGGATGGGAAGTATAGAGCAAGAATAGCAGATTTTGGAGCTTCTAGAATGATCTCTATCGAAGATACTCATCTCACCACTGTAGTTCAAGGAACTTTTGGATATTTAGATCCTGAATATTTCCATACTAGCCAATTGACAGAAAATAGTGATGTTACAGTTTTGGAGTAG 288 0.3576 MTWDMRLRIASEIAGDLFYLHSAASQPIYHRDVKSTNILLDGKYRARIADFGASRMISIEDTHLTTVVQGTFGYLDPEYFHTSQLTENSDVTVLE 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00846 95 Pfam Protein kinase domain 8 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00846 95 ProSiteProfiles Protein kinase domain profile. 1 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00846 95 SUPERFAMILY Protein kinase-like (PK-like) 1 91 IPR011009 -
Aip04g00846 95 ProSitePatterns Serine/Threonine protein kinases active-site signature. 28 40 IPR008271 GO:0004672|GO:0006468
Aip04g00846 95 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 1 91 - -
Aip04g00846 95 Gene3D Transferase(Phosphotransferase) domain 1 1 91 - -
Aip04g00846 95 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 91 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00846 Aip-Chr4 11243555 11243842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00846 1 91 Receptor kinase-like Gene Family AT1G79670 73.626 2.82e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip04g00846 Pkinase 3.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00846 - - gmx:100798794 169.474