Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00845 ATGGTTCTTGAACTTTTTTATGTCATGTTAATCCTGTGTTGTATACATAATCTGGCATTTGCACAGGACGAAAATACTCGTATAGCACCATTTGGCTGCAATTCCACATGTGGAAATGTTGAAATCCCTTTCCCATTTGGTATGAACGAACCCAATTATTGCTATGCAGACCACTGGTTCCAAATAGAGTGTAGGCACGATACACCTTACCTGAAATCTATAGGGCTGGAGGTCTCATCAATTGATGTATCAGAAGGCACGATTGAAATCATGCATCCAATTCACCGTTGGAACTGCAAACCCCAACACAACGCTACGAATACTGAGCAAGAAGTGGTTGACCTGAGAGGAAGCCCCTTCGTGTATTCGCAGGAAAACAACATGTTTGTGTCAGCTGGCTGCAATGAAATCTCTTTCTTGGTGTCCAACGGCACGCAAGTTAGCGGCTGCGTGTCAATTTGCGACGACAAGAAGGACGTTGAGGAGAACATTGAAATCCAAAATTGCAACGGCAAATACTGCTGTGTGACCTCCTTGCCTTTGTATCTCTCGGAATTTAACGTCACAACGGAGAGTTTCGGGAGTAACAACAACAATCGTGCTAGTGATGATGATGAGTGCAGTAGCTATGCGTTGATTGTGCATTACTTTCGTGTTCCTGACTACATGCGCTATGATAGCAGCTACGCCTATTACCGTTGGAATTCGATGACAGATCTTCGGAGTTTGAAGAAAGTTGCGGTGGTGCTTGAATGGGAGATTCATAACTCATCCATAACACTCCCTCGCTCAGGTCACTGCGTCAACACTAACATTACATCTGCAAAGAACAATCACTCAGGTCGGAGATGTTACTGCCTCGAAGACTCTTACGGCAATCCCTACATTGAAGGAGGCTGCAGCTACGCCAACGATTATGGTGACAACGGCGAAGGAAACAAAAACCGGTCAAAATGGGCTATAATAGGTGTTTTCTCGAGTGTTGGATCTATCATTTTTCTCCTTGGCTCATGGCGGGTTTATAAAGTTGTAAGGAGAAGAATAGTACAGAACCGCATAGAAAAAAACTTCAAAAAGAATGGAGGTTTGCTGCTAGAAAAAAGGATGTCTTCTGGCGAAGTTAATGTTGACAAAGTTAAACACTTTACCTTAAAGGAGTTAGAGAAGGCCACTGATAACTTCAACATGAACAGAGTTCTCGGTAAGGGAGGACAAGGCACCGTCTACAAAGGAATGCTTGTAGATGGAAAAATTGTTGCAGTCAAAAAATTTAGAGTCCACGGAAATGTTGAAGAATTCATTAACGAATTCGTCATTCTTTCACAAATTAACCATAGAAATGTGGTTAAGTTGTTAGGATGTTGTTTGGAGAAAGAAATTCCTTTGCTTGTTTATGAGTTCATTCCTAATGGCAATCTTTATGAATATTTGCATGGCCAAAATGAGGACTTGCCAATGACATGGGATATGCGTTTGAGAATTGCATCTGAGATTGCAGGAGCTTTGTTTTACTTACACTCTGCTGCTTCTCAACCAATTTATCACAGAGATGTGAAGTCAACAAATATTTTGTTGGATGGAAAGTACAGAGCAAAAGTAGCTGACTTTGGAGCTTCAAGAATGATCTCCATCGAAGATACTCACCTCACCACAGTAGTTCAAGGGACTTTTGGATATCTGGATCCTGAATACTTTCATACTAGTCAATTGACAGAAAAGAGTGATGTTTACAGTTTTGGAGTAGTTCTTCTTGAACTTTTGACAGGACAAAAGCCATTATCCTCCTTAAGACCCAACGAAGCAAAAAGTTTGGCTTCGTATTTCGTTCTTTCTGTTGAGGAAGATCGCTTGTTTGACATTATTGATGATAGGGTGACAAAAGAAGGAGACAAAGAACACATAATTGCTGTTGCGAATCTTGCATATAGATGCTTAGAGCTCAATGGGAAAAGAAGGCCAACTATGAAAGAAGTCACAAGAGAATTGGATGAGATCTGGAAATTGGAGAGGAAGTTTAATAATGCACAGCAACATCGTCATGAAGAAATTGAGCATCCTGCAATTGAATATCACCATGCTTGGGTTGCAAATTCTGCTCCTGATATAAGTCCAAGCAACGTAACACTCACCTCAGAGTCAGAAGCTATGCATATTCTTACCGAATAA 2166 0.4104 MVLELFYVMLILCCIHNLAFAQDENTRIAPFGCNSTCGNVEIPFPFGMNEPNYCYADHWFQIECRHDTPYLKSIGLEVSSIDVSEGTIEIMHPIHRWNCKPQHNATNTEQEVVDLRGSPFVYSQENNMFVSAGCNEISFLVSNGTQVSGCVSICDDKKDVEENIEIQNCNGKYCCVTSLPLYLSEFNVTTESFGSNNNNRASDDDECSSYALIVHYFRVPDYMRYDSSYAYYRWNSMTDLRSLKKVAVVLEWEIHNSSITLPRSGHCVNTNITSAKNNHSGRRCYCLEDSYGNPYIEGGCSYANDYGDNGEGNKNRSKWAIIGVFSSVGSIIFLLGSWRVYKVVRRRIVQNRIEKNFKKNGGLLLEKRMSSGEVNVDKVKHFTLKELEKATDNFNMNRVLGKGGQGTVYKGMLVDGKIVAVKKFRVHGNVEEFINEFVILSQINHRNVVKLLGCCLEKEIPLLVYEFIPNGNLYEYLHGQNEDLPMTWDMRLRIASEIAGALFYLHSAASQPIYHRDVKSTNILLDGKYRAKVADFGASRMISIEDTHLTTVVQGTFGYLDPEYFHTSQLTEKSDVYSFGVVLLELLTGQKPLSSLRPNEAKSLASYFVLSVEEDRLFDIIDDRVTKEGDKEHIIAVANLAYRCLELNGKRRPTMKEVTRELDEIWKLERKFNNAQQHRHEEIEHPAIEYHHAWVANSAPDISPSNVTLTSESEAMHILTE 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00845 721 SMART serkin_6 394 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00845 721 ProSiteProfiles Protein kinase domain profile. 394 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00845 721 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 12 719 - -
Aip04g00845 721 SUPERFAMILY Protein kinase-like (PK-like) 374 662 IPR011009 -
Aip04g00845 721 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 719 IPR045274 GO:0007166
Aip04g00845 721 CDD STKc_IRAK 400 665 - -
Aip04g00845 721 Pfam Protein tyrosine and serine/threonine kinase 395 662 IPR001245 GO:0004672|GO:0006468
Aip04g00845 721 Gene3D Transferase(Phosphotransferase) domain 1 468 693 - -
Aip04g00845 721 Gene3D Phosphorylase Kinase; domain 1 365 467 - -
Aip04g00845 721 Pfam Wall-associated receptor kinase galacturonan-binding 33 90 IPR025287 GO:0030247
Aip04g00845 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00845 Aip-Chr4 11234897 11239999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00845 2 716 Receptor kinase-like Gene Family AT1G16260 40.570 3.22e-169 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aip04g00845 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00845 - - gmx:100798794 825.469