Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00844 ATGTCTGCAAGAGTGAAATGTATCATGTTCTTATTCTTGTTGGTTGTGTTACGACCACTTTTTGTCAATAGCCAGTCAACGGTTTATGTTAAAAATGCTGTAGAGGGCAATTTGAAACTTACTATTCACTGCAAATCTAAGGATGAAGATCTTGGAGCAGTGACTCTCAACCCAAATCAATCCTATCGGTTTGTTGTCTTTCCTAAATTTTTCGGCGGGACATTATATTTTTGCACTTTTCGTTGGCCAGGTTCATGTCATTGGTTTGACATATATGTAGAAAGTAGAGATCTAAAAATTTGTTATGATGATCATCCAACTGCATGTAACTGGATTATAAAGAAGGCTGGACCATGCCAAAATTCACCTCTTTCGAATCAATGTTTCAAATGGAATCCAGACACGTGTGTTCCATGA 417 0.3717 MSARVKCIMFLFLLVVLRPLFVNSQSTVYVKNAVEGNLKLTIHCKSKDEDLGAVTLNPNQSYRFVVFPKFFGGTLYFCTFRWPGSCHWFDIYVESRDLKICYDDHPTACNWIIKKAGPCQNSPLSNQCFKWNPDTCVP 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00844 138 Pfam Plant self-incompatibility protein S1 27 131 IPR010264 -
Aip04g00844 138 PANTHER S-PROTEIN HOMOLOG 2 9 128 - -
Aip04g00844 138 PANTHER - 9 128 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00844 Aip-Chr4 11166049 11167842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00844 21 135 Carbohydrate Esterase AT3G16970 41.525 4.04e-26 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00844 - - cam:101514770 106.301