Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00841 ATGGAAGAGGTGTTGAATTCAATTAGCCATGGTTGCGAATTAGCGAAGAAAATAGAATCGGAGCAACTACCAAATATGGCCAATATCCAACCTGATATATTAGTGTCTTCTATTGATGAAGTTGTGAAGGCACTCAATGGTGCAAAGGAGAAGCTGTTGATGACTATGGTGAATAACAATTTGATGGAAGCTTCTTCTTCATTTGCTCCATTGTTCATGCATGAAGCTCAACAACAAATGGGTGCATGCGCAAGTTCTTTCTCAATTATGATGCAAGAAAGGATGATGAAGTCTTCTTCTTCTACAAGCTATGCACACACAATGGATCAGGAAGAGAATAATAAAGAAACGCAAGGAAAAGTTCTTCAAGAAAAATGGCGAGTTCTTGGAAAAGGAGGTCAAGGTACCGTTTACAAGGGAATGCTAGTAGATGGCAAAATCGTTGCAGTCAAAAAGTTCAAAGTCCAAGGAAACACTGCAGAATTCATCAATGAATTCGTTGTTCTTAATCAAATTAACCATAGAAATGTGGTTAAGTTATTAGGGTGTTGTTTGGAGGATGAAGTTCCTTTGCTCGTTTATGAGTTTATTCCCAATGGTAACCTTTATGAACATCTTCATGAACAAAATGAGAATTTACCAATGACATGGGACATGAGATTGAGAATTGCGAGTGAGATTGCAGGAGCACTTTTTTACTTACACTCCATTGCTTCTCAACCCATTTATCACAGAGATATCAAATCAACAAACATACTATTGGATGAAAAGTACAGGGCAAAAGTGGCAGATTTTGGAACCTCTAGAATAGTTTCTGCTGAAGCTACTCATCTCACTACGGTAGTTCAAGGAACTTTTGGTTATTTAGATCCCGAATACTTTCAAACTAGTCAGTTTACTGATAAGAGCGATGTTTATAGTTTTGGAGTAGTGCTTGTCGAACTTTTAACCGGACAGAAGGCAATATCGTCGATAAGATCGGATGAAGTGAGGGGTCTAGCATCGTTTTTTGTTGTGTGTATGGAAGAGAATCGGGTATTTGACATTGTTGACAAAAGAGTGTTGAAGGAGGGAGAGAAAGAACATATAATTGCAGTGGCTAATCTTGCATATAGGTGTTTAGAGTTGAATGGGAGAAAAAGACCTACTATGAAACAAGTTACCTTGGAATTAGAAGGGATTAGAAGATTGGATTATTGGAAGGGTGGTTCGGCACAAGAAAACTTTGAAGAAATTGAGCTCGATAGAAATGAAGACAATCAACTATGGGATGGATATTCATATTCTAATATGTCAGAAACATTGCACACTACTACAAGTAGCAGCAGGGAACTCTCCGAGACTTGGGGTCCTCCAATAAAAACAGTCGAGCAAAATGGGATATTGTTGGAATTTCGTCAAGCCTCGGATCCATCATTCTACTCCTTGGTCTATGCTGAGACAAAGGCTAACAATGAAAGAAGTGACATTGGAATTAGAAAGGATGATGCACAAGAACAATACCGCCATGAAGAAATTGATCTCGTTGGAACTGAAATGACATGGAACAATGGAAATTCATATACATCCGATACATTACCAGTTGTAAGCAGCTAA 1596 0.3828 MEEVLNSISHGCELAKKIESEQLPNMANIQPDILVSSIDEVVKALNGAKEKLLMTMVNNNLMEASSSFAPLFMHEAQQQMGACASSFSIMMQERMMKSSSSTSYAHTMDQEENNKETQGKVLQEKWRVLGKGGQGTVYKGMLVDGKIVAVKKFKVQGNTAEFINEFVVLNQINHRNVVKLLGCCLEDEVPLLVYEFIPNGNLYEHLHEQNENLPMTWDMRLRIASEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKVADFGTSRIVSAEATHLTTVVQGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELLTGQKAISSIRSDEVRGLASFFVVCMEENRVFDIVDKRVLKEGEKEHIIAVANLAYRCLELNGRKRPTMKQVTLELEGIRRLDYWKGGSAQENFEEIELDRNEDNQLWDGYSYSNMSETLHTTTSSSRELSETWGPPIKTVEQNGILLEFRQASDPSFYSLVYAETKANNERSDIGIRKDDAQEQYRHEEIDLVGTEMTWNNGNSYTSDTLPVVSS 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00841 531 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 124 415 IPR045274 GO:0007166
Aip04g00841 531 CDD STKc_IRAK 129 394 - -
Aip04g00841 531 Pfam Protein kinase domain 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00841 531 ProSiteProfiles Protein kinase domain profile. 123 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00841 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Aip04g00841 531 Gene3D Phosphorylase Kinase; domain 1 94 196 - -
Aip04g00841 531 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 124 415 - -
Aip04g00841 531 Gene3D Transferase(Phosphotransferase) domain 1 197 415 - -
Aip04g00841 531 SUPERFAMILY Protein kinase-like (PK-like) 125 391 IPR011009 -
Aip04g00841 531 SMART serkin_6 123 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00841 Aip-Chr4 11128193 11134252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00841 127 395 Receptor kinase-like Gene Family AT1G69730 67.647 1.17e-129 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aip04g00841 Pkinase 6.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00841 - - gmx:100798794 487.648