Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip04g00812 | ATGAACATGATGAATCTCTTTAGCCTTGTAGTATTGTCCTTATCTTTCTTCACAGTTATGGGGCAACTACCTTCCCAGGACATTTTGGCATTGTTGGAGTTCAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTTCTCAATTCATGGAATGAGGAATCCATTGACTTTGATGGATGCCCTTCTTCATGGAATGGAGTTCTTTGTAATGCTGGTAATGTTGCTGGGGTTGTGCTTGATAATCTAGGTCTCTCTGCTGATGCTGACTTGAGTGTATTTTCAAACCTCACAAAGCTTGTTAGGCTTTCCATGTCCAATAACTCGATTTCAGGAAAACTACCTGGCAACATTGGTGATTTAAAAGGCCTTGAGTTTCTGGATATCTCCAATAACCTCTTTTCTTCGGCATTGCCATCAGGAGTTGGCAGCTTAGGTAGCTTGCAGAATCTGTCCTTGGCTGGGAATAACTTCTCTGGCCGGATACCTGACTCGATTTCGGCAATGGCTTCCCTCCAGTCTTTGGACCTGAGCCGCAACTCCTTTTCTGGAGCACTGCCAGTATCGTTGACTAAGCTGGCTAACTTGGTATCTCTTAACTTGTCTCATAATGGCTTCACTGGGAAAATTCCCAAAGGTTTTGAGCAGATGTCCACTCTTGAAAACCTTGACTTACATGCCAATATGCTTGATGGTCATTTAGATGTTGAATTTATGCTTTTATCAAGTGCCAGCTATGTTGATTTCAGTGAGAATATGCTAGAGAGTGATAATTCTGAGAAGTTTCTACAACGGATATCTGAAAGTATTAAGCATCTGAATCTAAGCCACAACCGGTTTACTGGATCACTGGATGGTGGAGCCGAGCTACCGGTTTTCGAAAATGTGAAGGTGTTGGACCTCAGCTACAATCAATTGGATGGAGAATTGCCTGGATTTGATTTTGTTTATGATCTTGAGGTCCTTAAGCTTAGCAACAACCGATTTTCAGGATTTATTCCTATTGGCCTTCTAAAAGGAGACTCTTTGGTTTTAACTGAACTAGATTTGAGTGCCAACAATCTCACAGGGACACTGAGTATAATTACATCAACTACACTGCACTATCTTAATCTCTCATCGAATGGCTTCAGTGGTGAGCTCCCCTTGCTGACTGGAAGCTGTGCTATACTCGATCTGTCGAAGAACAGATTAGAAGGAAATTTAACCAGGATGTTGAAATGGGGGAATCTAGAATTTCTTGATCTCAGTGGAAACCATTTGACAGGGAACATACCTGAGGCAACTCCTCAATTTTTGCGGTTAAATTATTTGAATCTGTCCAGCAATTCTCTTAGCAGCTCCCTTCCAAGAGTATTAACTAAATATCCAAAGCTTAGAGTGCTTGATATTAGTTCAAACCAAATCAATGGACAACTTCAAGCCGCATTGCTTGCAATGCCAACTTTGCAAGAGCTCCATCTTGAAAATAATATGATCACTGGTGGTGTTAGTTTCTCATCTTCTCCTGGTCAATCAGATCTTCAGATTCTTGATCTTTCTCATAACAAGTTTAATGGCTATTTTCCCGACGAGTTTTGGTCTTTAAATGGCCTTAAAGTGCTCAATATTGCCGGAAATAACTTTTCTGGTTCTCTTCCAACTGCTATTGCTGACATGAGTTCACTATACTCCTTGGATATATCAGAAAATCATTTTACCGGGCCTCTGCCAAATAACATCCCAAAGGAGCTCACAAACTTCAATGCTTCACTGAATGATTTTTCTGGAGTTGTTCCGGAAAGTCTAAGGAAATTCCCTAATTCATCTTTCTTTCCTGGGAATTCCAAGTTACATCTTCCTACTAGCCTTCCTGGATCAACCACTCCACCAGCTGAAAGTTCCAAGAAGTCCATGAGCACCATTGTTAAAGTAATAATCATAGTGTCATGTGTTGTTGCTATCTTCATATTAGTCTTGCTTGCAGTCTTCATACTCTACATCCGTAAGTCAAGATCTCCACCGGAATATGAAACAAGTAAGGATATCCGTGCTCGTCCACAGCCAGTCAGCTCGGCTCCGGTTCGTGCCACAGACAGGGGTGGTCCTTTGGTTGTATCAGCCGAGGACCTTGTGACGTCCCGGAAAGAATCACCATCAGAGATAATCAGCCCGGATGAAAAATTGGCAGCTGTAACCGGGTTCTCCCCCTCAAAACAAAGCCACTTTTCCTGGTCACCGGAGTCAGGTGATTCATATACTGCTGAAAATCTTGCAAGACTAGATACAAGATCACCAGATAGGTTGGTTGGAGAGCTGCATTTTCTTGATGATACAATATCTTTGACACCTGAAGAGCTCTCTCGGGCCCCGGCTGAAGTTTTGGGGAGGAGCAGTCATGGAACTTCTTACAAGGCAACTTTAGAGAATGGCTTGTTCTTGAGAGTGAAGTGGCTAAGAGAAGGAGTGGCAAAACAGAGAAAAGAGTTTGTTAGAGAGATAAAGAAATTTGCAAACATAAGGCATCCAAATGTTGTGGGATTGAGAGGATACTATTGGGGTCCTACCCAGCACGAGAAACTCATTCTTTCAGATTACATCTCTCCGGGAAGCCTTGCAAGTTTTCTTTATGATCGACCAGGAAGAAAAGGTCCACCATTAACTTGGGTGCAGAGGCTCAAGATTGCAGTTGATGTAGCCCGTGGTTTGAACTATCTCCATTTTGATCGCGCCGTCCCTCACGGGAACCTAAAAGCCACAAATGTGTTGTTAGATACTGGTGATATGAATGCTCGTGTTGCTGATTATTGCCTTCACCGGCTTATGACACAGGCCGGTACTGTTGAACAGATTCTTGATGCTGGTGTCTTAGGCTACCGTGCACCTGAGTTAGCTGCTTCCAAGAAGCCAATTCCATCCTTCAAATCAGATGTTTATGCTTTTGGAGTGATACTCTTGGAACTTCTAACTGGAAGGTGTGCTGGTGATGTGATTTCTGGTGAGGAGGGAGGTGTTGATTTGACAGAATGGGTGAGGTTGCGAGTGTCCGAAGGTCGAGGCTCGGATTGTTTTGATGCTACCTTGATGCCGGAACTGAGCAATCCGGTGGCGGAAAAGGGAATGAAGGAGGTCCTAGGAATAGCTATCAGATGCATCCGATCCGTTTCGGAGAGGCCAGGCATCAAGACTATATATGAAGAGCTTTCTGCTATATAA | 3192 | 0.4317 | MNMMNLFSLVVLSLSFFTVMGQLPSQDILALLEFKKGIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNAGNVAGVVLDNLGLSADADLSVFSNLTKLVRLSMSNNSISGKLPGNIGDLKGLEFLDISNNLFSSALPSGVGSLGSLQNLSLAGNNFSGRIPDSISAMASLQSLDLSRNSFSGALPVSLTKLANLVSLNLSHNGFTGKIPKGFEQMSTLENLDLHANMLDGHLDVEFMLLSSASYVDFSENMLESDNSEKFLQRISESIKHLNLSHNRFTGSLDGGAELPVFENVKVLDLSYNQLDGELPGFDFVYDLEVLKLSNNRFSGFIPIGLLKGDSLVLTELDLSANNLTGTLSIITSTTLHYLNLSSNGFSGELPLLTGSCAILDLSKNRLEGNLTRMLKWGNLEFLDLSGNHLTGNIPEATPQFLRLNYLNLSSNSLSSSLPRVLTKYPKLRVLDISSNQINGQLQAALLAMPTLQELHLENNMITGGVSFSSSPGQSDLQILDLSHNKFNGYFPDEFWSLNGLKVLNIAGNNFSGSLPTAIADMSSLYSLDISENHFTGPLPNNIPKELTNFNASLNDFSGVVPESLRKFPNSSFFPGNSKLHLPTSLPGSTTPPAESSKKSMSTIVKVIIIVSCVVAIFILVLLAVFILYIRKSRSPPEYETSKDIRARPQPVSSAPVRATDRGGPLVVSAEDLVTSRKESPSEIISPDEKLAAVTGFSPSKQSHFSWSPESGDSYTAENLARLDTRSPDRLVGELHFLDDTISLTPEELSRAPAEVLGRSSHGTSYKATLENGLFLRVKWLREGVAKQRKEFVREIKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWVQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTGDMNARVADYCLHRLMTQAGTVEQILDAGVLGYRAPELAASKKPIPSFKSDVYAFGVILLELLTGRCAGDVISGEEGGVDLTEWVRLRVSEGRGSDCFDATLMPELSNPVAEKGMKEVLGIAIRCIRSVSERPGIKTIYEELSAI | 1063 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip04g00812 | 1063 | MobiDBLite | consensus disorder prediction | 669 | 691 | - | - | |
Aip04g00812 | 1063 | ProSiteProfiles | Leucine-rich repeat profile. | 409 | 431 | IPR001611 | GO:0005515 | |
Aip04g00812 | 1063 | Pfam | Leucine Rich repeat | 363 | 379 | IPR001611 | GO:0005515 | |
Aip04g00812 | 1063 | SUPERFAMILY | RNI-like | 292 | 598 | - | - | |
Aip04g00812 | 1063 | PANTHER | - | 9 | 1063 | - | - | |
Aip04g00812 | 1063 | Pfam | Leucine rich repeat | 409 | 468 | IPR001611 | GO:0005515 | |
Aip04g00812 | 1063 | Pfam | Leucine rich repeat | 146 | 204 | IPR001611 | GO:0005515 | |
Aip04g00812 | 1063 | Pfam | Leucine rich repeat | 480 | 541 | IPR001611 | GO:0005515 | |
Aip04g00812 | 1063 | Gene3D | Ribonuclease Inhibitor | 141 | 238 | IPR032675 | - | |
Aip04g00812 | 1063 | Gene3D | Ribonuclease Inhibitor | 26 | 140 | IPR032675 | - | |
Aip04g00812 | 1063 | PANTHER | OS07G0626500 PROTEIN | 9 | 1063 | - | - | |
Aip04g00812 | 1063 | Gene3D | Ribonuclease Inhibitor | 239 | 617 | IPR032675 | - | |
Aip04g00812 | 1063 | SMART | LRR_typ_2 | 120 | 144 | IPR003591 | - | |
Aip04g00812 | 1063 | SMART | LRR_typ_2 | 431 | 454 | IPR003591 | - | |
Aip04g00812 | 1063 | SMART | LRR_typ_2 | 168 | 191 | IPR003591 | - | |
Aip04g00812 | 1063 | SMART | LRR_typ_2 | 192 | 215 | IPR003591 | - | |
Aip04g00812 | 1063 | SMART | LRR_typ_2 | 528 | 551 | IPR003591 | - | |
Aip04g00812 | 1063 | SMART | LRR_typ_2 | 315 | 339 | IPR003591 | - | |
Aip04g00812 | 1063 | SMART | LRR_typ_2 | 96 | 119 | IPR003591 | - | |
Aip04g00812 | 1063 | Pfam | Protein tyrosine and serine/threonine kinase | 785 | 983 | IPR001245 | GO:0004672|GO:0006468 | |
Aip04g00812 | 1063 | Gene3D | Phosphorylase Kinase; domain 1 | 772 | 858 | - | - | |
Aip04g00812 | 1063 | Gene3D | Transferase(Phosphotransferase) domain 1 | 860 | 1063 | - | - | |
Aip04g00812 | 1063 | ProSiteProfiles | Protein kinase domain profile. | 781 | 1063 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip04g00812 | 1063 | Pfam | Leucine rich repeat N-terminal domain | 25 | 70 | IPR013210 | - | |
Aip04g00812 | 1063 | SUPERFAMILY | L domain-like | 46 | 381 | - | - | |
Aip04g00812 | 1063 | SUPERFAMILY | Protein kinase-like (PK-like) | 784 | 1058 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip04g00812 | Aip-Chr4 | 10659468 | 10664279 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip04g00812 | 27 | 1051 | Receptor kinase-like Gene Family | AT3G56370 | 30.930 | 3.56e-103 | 345 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Aip04g00812 | PK_Tyr_Ser-Thr | 2.7e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip04g00812 | - | - | gmx:100793639 | 1733.77 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip04g00812 | 04 | 10659468 | 10664279 | Aip04g00812 | 04 | 10659468 | 10664279 | ECH |