Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00812 ATGAACATGATGAATCTCTTTAGCCTTGTAGTATTGTCCTTATCTTTCTTCACAGTTATGGGGCAACTACCTTCCCAGGACATTTTGGCATTGTTGGAGTTCAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTTCTCAATTCATGGAATGAGGAATCCATTGACTTTGATGGATGCCCTTCTTCATGGAATGGAGTTCTTTGTAATGCTGGTAATGTTGCTGGGGTTGTGCTTGATAATCTAGGTCTCTCTGCTGATGCTGACTTGAGTGTATTTTCAAACCTCACAAAGCTTGTTAGGCTTTCCATGTCCAATAACTCGATTTCAGGAAAACTACCTGGCAACATTGGTGATTTAAAAGGCCTTGAGTTTCTGGATATCTCCAATAACCTCTTTTCTTCGGCATTGCCATCAGGAGTTGGCAGCTTAGGTAGCTTGCAGAATCTGTCCTTGGCTGGGAATAACTTCTCTGGCCGGATACCTGACTCGATTTCGGCAATGGCTTCCCTCCAGTCTTTGGACCTGAGCCGCAACTCCTTTTCTGGAGCACTGCCAGTATCGTTGACTAAGCTGGCTAACTTGGTATCTCTTAACTTGTCTCATAATGGCTTCACTGGGAAAATTCCCAAAGGTTTTGAGCAGATGTCCACTCTTGAAAACCTTGACTTACATGCCAATATGCTTGATGGTCATTTAGATGTTGAATTTATGCTTTTATCAAGTGCCAGCTATGTTGATTTCAGTGAGAATATGCTAGAGAGTGATAATTCTGAGAAGTTTCTACAACGGATATCTGAAAGTATTAAGCATCTGAATCTAAGCCACAACCGGTTTACTGGATCACTGGATGGTGGAGCCGAGCTACCGGTTTTCGAAAATGTGAAGGTGTTGGACCTCAGCTACAATCAATTGGATGGAGAATTGCCTGGATTTGATTTTGTTTATGATCTTGAGGTCCTTAAGCTTAGCAACAACCGATTTTCAGGATTTATTCCTATTGGCCTTCTAAAAGGAGACTCTTTGGTTTTAACTGAACTAGATTTGAGTGCCAACAATCTCACAGGGACACTGAGTATAATTACATCAACTACACTGCACTATCTTAATCTCTCATCGAATGGCTTCAGTGGTGAGCTCCCCTTGCTGACTGGAAGCTGTGCTATACTCGATCTGTCGAAGAACAGATTAGAAGGAAATTTAACCAGGATGTTGAAATGGGGGAATCTAGAATTTCTTGATCTCAGTGGAAACCATTTGACAGGGAACATACCTGAGGCAACTCCTCAATTTTTGCGGTTAAATTATTTGAATCTGTCCAGCAATTCTCTTAGCAGCTCCCTTCCAAGAGTATTAACTAAATATCCAAAGCTTAGAGTGCTTGATATTAGTTCAAACCAAATCAATGGACAACTTCAAGCCGCATTGCTTGCAATGCCAACTTTGCAAGAGCTCCATCTTGAAAATAATATGATCACTGGTGGTGTTAGTTTCTCATCTTCTCCTGGTCAATCAGATCTTCAGATTCTTGATCTTTCTCATAACAAGTTTAATGGCTATTTTCCCGACGAGTTTTGGTCTTTAAATGGCCTTAAAGTGCTCAATATTGCCGGAAATAACTTTTCTGGTTCTCTTCCAACTGCTATTGCTGACATGAGTTCACTATACTCCTTGGATATATCAGAAAATCATTTTACCGGGCCTCTGCCAAATAACATCCCAAAGGAGCTCACAAACTTCAATGCTTCACTGAATGATTTTTCTGGAGTTGTTCCGGAAAGTCTAAGGAAATTCCCTAATTCATCTTTCTTTCCTGGGAATTCCAAGTTACATCTTCCTACTAGCCTTCCTGGATCAACCACTCCACCAGCTGAAAGTTCCAAGAAGTCCATGAGCACCATTGTTAAAGTAATAATCATAGTGTCATGTGTTGTTGCTATCTTCATATTAGTCTTGCTTGCAGTCTTCATACTCTACATCCGTAAGTCAAGATCTCCACCGGAATATGAAACAAGTAAGGATATCCGTGCTCGTCCACAGCCAGTCAGCTCGGCTCCGGTTCGTGCCACAGACAGGGGTGGTCCTTTGGTTGTATCAGCCGAGGACCTTGTGACGTCCCGGAAAGAATCACCATCAGAGATAATCAGCCCGGATGAAAAATTGGCAGCTGTAACCGGGTTCTCCCCCTCAAAACAAAGCCACTTTTCCTGGTCACCGGAGTCAGGTGATTCATATACTGCTGAAAATCTTGCAAGACTAGATACAAGATCACCAGATAGGTTGGTTGGAGAGCTGCATTTTCTTGATGATACAATATCTTTGACACCTGAAGAGCTCTCTCGGGCCCCGGCTGAAGTTTTGGGGAGGAGCAGTCATGGAACTTCTTACAAGGCAACTTTAGAGAATGGCTTGTTCTTGAGAGTGAAGTGGCTAAGAGAAGGAGTGGCAAAACAGAGAAAAGAGTTTGTTAGAGAGATAAAGAAATTTGCAAACATAAGGCATCCAAATGTTGTGGGATTGAGAGGATACTATTGGGGTCCTACCCAGCACGAGAAACTCATTCTTTCAGATTACATCTCTCCGGGAAGCCTTGCAAGTTTTCTTTATGATCGACCAGGAAGAAAAGGTCCACCATTAACTTGGGTGCAGAGGCTCAAGATTGCAGTTGATGTAGCCCGTGGTTTGAACTATCTCCATTTTGATCGCGCCGTCCCTCACGGGAACCTAAAAGCCACAAATGTGTTGTTAGATACTGGTGATATGAATGCTCGTGTTGCTGATTATTGCCTTCACCGGCTTATGACACAGGCCGGTACTGTTGAACAGATTCTTGATGCTGGTGTCTTAGGCTACCGTGCACCTGAGTTAGCTGCTTCCAAGAAGCCAATTCCATCCTTCAAATCAGATGTTTATGCTTTTGGAGTGATACTCTTGGAACTTCTAACTGGAAGGTGTGCTGGTGATGTGATTTCTGGTGAGGAGGGAGGTGTTGATTTGACAGAATGGGTGAGGTTGCGAGTGTCCGAAGGTCGAGGCTCGGATTGTTTTGATGCTACCTTGATGCCGGAACTGAGCAATCCGGTGGCGGAAAAGGGAATGAAGGAGGTCCTAGGAATAGCTATCAGATGCATCCGATCCGTTTCGGAGAGGCCAGGCATCAAGACTATATATGAAGAGCTTTCTGCTATATAA 3192 0.4317 MNMMNLFSLVVLSLSFFTVMGQLPSQDILALLEFKKGIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNAGNVAGVVLDNLGLSADADLSVFSNLTKLVRLSMSNNSISGKLPGNIGDLKGLEFLDISNNLFSSALPSGVGSLGSLQNLSLAGNNFSGRIPDSISAMASLQSLDLSRNSFSGALPVSLTKLANLVSLNLSHNGFTGKIPKGFEQMSTLENLDLHANMLDGHLDVEFMLLSSASYVDFSENMLESDNSEKFLQRISESIKHLNLSHNRFTGSLDGGAELPVFENVKVLDLSYNQLDGELPGFDFVYDLEVLKLSNNRFSGFIPIGLLKGDSLVLTELDLSANNLTGTLSIITSTTLHYLNLSSNGFSGELPLLTGSCAILDLSKNRLEGNLTRMLKWGNLEFLDLSGNHLTGNIPEATPQFLRLNYLNLSSNSLSSSLPRVLTKYPKLRVLDISSNQINGQLQAALLAMPTLQELHLENNMITGGVSFSSSPGQSDLQILDLSHNKFNGYFPDEFWSLNGLKVLNIAGNNFSGSLPTAIADMSSLYSLDISENHFTGPLPNNIPKELTNFNASLNDFSGVVPESLRKFPNSSFFPGNSKLHLPTSLPGSTTPPAESSKKSMSTIVKVIIIVSCVVAIFILVLLAVFILYIRKSRSPPEYETSKDIRARPQPVSSAPVRATDRGGPLVVSAEDLVTSRKESPSEIISPDEKLAAVTGFSPSKQSHFSWSPESGDSYTAENLARLDTRSPDRLVGELHFLDDTISLTPEELSRAPAEVLGRSSHGTSYKATLENGLFLRVKWLREGVAKQRKEFVREIKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWVQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTGDMNARVADYCLHRLMTQAGTVEQILDAGVLGYRAPELAASKKPIPSFKSDVYAFGVILLELLTGRCAGDVISGEEGGVDLTEWVRLRVSEGRGSDCFDATLMPELSNPVAEKGMKEVLGIAIRCIRSVSERPGIKTIYEELSAI 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00812 1063 MobiDBLite consensus disorder prediction 669 691 - -
Aip04g00812 1063 ProSiteProfiles Leucine-rich repeat profile. 409 431 IPR001611 GO:0005515
Aip04g00812 1063 Pfam Leucine Rich repeat 363 379 IPR001611 GO:0005515
Aip04g00812 1063 SUPERFAMILY RNI-like 292 598 - -
Aip04g00812 1063 PANTHER - 9 1063 - -
Aip04g00812 1063 Pfam Leucine rich repeat 409 468 IPR001611 GO:0005515
Aip04g00812 1063 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Aip04g00812 1063 Pfam Leucine rich repeat 480 541 IPR001611 GO:0005515
Aip04g00812 1063 Gene3D Ribonuclease Inhibitor 141 238 IPR032675 -
Aip04g00812 1063 Gene3D Ribonuclease Inhibitor 26 140 IPR032675 -
Aip04g00812 1063 PANTHER OS07G0626500 PROTEIN 9 1063 - -
Aip04g00812 1063 Gene3D Ribonuclease Inhibitor 239 617 IPR032675 -
Aip04g00812 1063 SMART LRR_typ_2 120 144 IPR003591 -
Aip04g00812 1063 SMART LRR_typ_2 431 454 IPR003591 -
Aip04g00812 1063 SMART LRR_typ_2 168 191 IPR003591 -
Aip04g00812 1063 SMART LRR_typ_2 192 215 IPR003591 -
Aip04g00812 1063 SMART LRR_typ_2 528 551 IPR003591 -
Aip04g00812 1063 SMART LRR_typ_2 315 339 IPR003591 -
Aip04g00812 1063 SMART LRR_typ_2 96 119 IPR003591 -
Aip04g00812 1063 Pfam Protein tyrosine and serine/threonine kinase 785 983 IPR001245 GO:0004672|GO:0006468
Aip04g00812 1063 Gene3D Phosphorylase Kinase; domain 1 772 858 - -
Aip04g00812 1063 Gene3D Transferase(Phosphotransferase) domain 1 860 1063 - -
Aip04g00812 1063 ProSiteProfiles Protein kinase domain profile. 781 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00812 1063 Pfam Leucine rich repeat N-terminal domain 25 70 IPR013210 -
Aip04g00812 1063 SUPERFAMILY L domain-like 46 381 - -
Aip04g00812 1063 SUPERFAMILY Protein kinase-like (PK-like) 784 1058 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00812 Aip-Chr4 10659468 10664279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00812 27 1051 Receptor kinase-like Gene Family AT3G56370 30.930 3.56e-103 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip04g00812 PK_Tyr_Ser-Thr 2.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00812 - - gmx:100793639 1733.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00812 04 10659468 10664279 Aip04g00812 04 10659468 10664279 ECH