Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00810 ATGTGGAGGGTTCTTGGGGTAGGACACTCTTATTTACTGATTCTGATGGTGTTAGTCTCAGTGAGATTGAGCATTGTTGAGGCTCAAAAAAAGTCCGTTCTCATAAACTGTGGTTCAAACTCTTCTGTGAATGTGGATGGTAGAAGATGGGTTGGGGATATGAGCCCTAATAATAATGTCACTCTTAGTTCCCCTGGTGTTGCAGTATCCACCTCTCCATTTAGTGGAAGTTCTATCTATGATTCACTCTACAAAACAGCCAGGATTTTCACTGGTTCTTTGAATTACACAATCAAAGATCTTCAAGGGAACTATGTTCTTAGGTTCCATTTTTCCCCCTTTGTGGATGTTGAGGACTACAATGTGAATAAGTCCTCATTTAGTGTGGTGGCTAATAGTCTGAAACTACTCTCTGAGTTCAATGTTCCGGAGAAGATTTCGCAGTTGCAGAATTCGGGAAAGAATTCTAGTTCATTCTCCTTGATTAAGGAGTACCTTTTTGATATCAGTGCAGAGCTTGTGATTGAGTTTGTTTCAACTGGAAACTCCTTTGGATTTGTCAATGCCATTGAAGTTGTCCCAGTTGTGGATGAGCTCTTTGCCAGCTCAGTCAGAAAAGTTGGTGGTGGAAACCTGAATGTGACGGGACGTGGAATGGAGACTATGTATAGATTAAATGTTGGTGGTCCTGAGATTCAACCTGATCAAGATCCTGATCTTTGGAGAACTTGGGAAATGGATTCTGGCTATATGATCACACAAAATGCTGGCATAGGAATTAACAACAGTTCCAATATCACTTATGCTTCTGCAAATGATACTTCAGTAGCTCCTCTACTTGTATACGAAACTGCAAGGGCAATGTCAAACACAGAAGTCTTGGACAAGAGATTTAACATGTCCTGGAAATTCGAAGTGGATCCCGATTTTGATTATTTGGTCCGGCTACATTTCTGCGAGTTGGTTTATGATAAGGCGAACGAGAGGATTTTCAAGATCTACATAAACAACAGGACTGCTGCAGATAATGTTGATGTTTATGTTCAAGCAGGAGGGAAGAATAAAGCATATCACCTGGACTATTTCGACGCCATGTCTTTGAGCATTGATACATTATGGGTTCAACTAGGTCCTGATGCAGGTGCTGGTGCTGCGGGAACTGATGCTCTCTTGAATGGACTAGAGATCTTCAAGCTTAGTCGAAATGGGAATCTAGCCTATGTCGATAAACATGACTCAGCTGGCAATGCAGCAAGCAAATCAAAAGTTCTTTGGGTTGGAATTGGAGCAGGTCTAGCTTCTATTGCTGTAATTGCAGTTATAGTTATTCTTGTTTTCTGTTTCTGCAGAAGCCGGAAGAACAAATCAAGTGACACGAAAAACAATTCTCCTGGTTGGCGACCTTTGTTCCTTGTTGGGGCGGCTGTGAACAGCACCATGGCTGCGAAGGGATCATCAGGAAGTCAAAAAGCATATGGATCTGTGGTCTCAACAAGAGCTGGCAAGCACTTTACATTGGCTGAAATCATTGCTGCCACAAAAAATTTTGATGAGAGCTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTGTACAAGGGGGAGATTGATGGTGGTGTCCTTGCTGCGATCAAGCGATCCAACCCGCAATCTGAGCAAGGCTTGGCTGAATTTGAGACAGAAATTGAGATGCTCTCCAAACTCAGGCATAGGCATCTTGTGTCATTGATTGGTTTCTGTGAAGAAAAAAATGAAATGATTCTGGTTTATGAGTATATGTCCAATGGAACTCTTAGAAGCCACTTGTTTGGGAGTGATCTTCCCCCATTAACTTGGAAGCAACGTCTCGAGGTGTGCATTGGCGCTGCTAGGGGACTTCACTACCTACATACAGGAGCCGAGCGTGGTATAATTCACAGGGATGTCAAGACAACCAACATATTGCTGGATGAGAACTTTGTAGCCAAAATGGCCGATTTTGGTTTGTCGAAAGATGGACCGGCTTTGGACCATACTCATGTTAGTACAGCTGTGAAGGGAAGCTTTGGCTATCTAGACCCGGAGTACTTCAGGAGACAGCAGTTGACCGAGAAATCGGATGTGTACTCGTTTGGGGTTGTGTTGTTTGAAGTTGTTTGTGCTAGAGCTGTGATCAACCCAACCTTGCCTAAAGATCAGATCAATCTTGCAGAATGGGCAATGAGATGGCAAAGGCAAAGATCAATTGAAACAATCATTGATCCTCATCTCAGAGGAAACTATTGTCCCGAATCCTTGGCGAAGTTTGGGGAGATAGCCGAGAAATGTCTCGCGGACGATGGGAAGAGCAGGCCAACTATGGGGGAGGTGTTGTGGCACTTAGAATATGTGTTGCAGCTACATGAAGCTTGGTTGAACAGGGACAGTATTGTAACTTCCTTCTCAAGTAGCCAAGATTTGAGAGGTGCAAAAGATGGAGGACTAGAATTGGTGCATGAGTCTTCAAGTCAAGATGAAGAAAATGAATGA 2505 0.4319 MWRVLGVGHSYLLILMVLVSVRLSIVEAQKKSVLINCGSNSSVNVDGRRWVGDMSPNNNVTLSSPGVAVSTSPFSGSSIYDSLYKTARIFTGSLNYTIKDLQGNYVLRFHFSPFVDVEDYNVNKSSFSVVANSLKLLSEFNVPEKISQLQNSGKNSSSFSLIKEYLFDISAELVIEFVSTGNSFGFVNAIEVVPVVDELFASSVRKVGGGNLNVTGRGMETMYRLNVGGPEIQPDQDPDLWRTWEMDSGYMITQNAGIGINNSSNITYASANDTSVAPLLVYETARAMSNTEVLDKRFNMSWKFEVDPDFDYLVRLHFCELVYDKANERIFKIYINNRTAADNVDVYVQAGGKNKAYHLDYFDAMSLSIDTLWVQLGPDAGAGAAGTDALLNGLEIFKLSRNGNLAYVDKHDSAGNAASKSKVLWVGIGAGLASIAVIAVIVILVFCFCRSRKNKSSDTKNNSPGWRPLFLVGAAVNSTMAAKGSSGSQKAYGSVVSTRAGKHFTLAEIIAATKNFDESLVIGVGGFGKVYKGEIDGGVLAAIKRSNPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMSNGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMADFGLSKDGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSIETIIDPHLRGNYCPESLAKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNRDSIVTSFSSSQDLRGAKDGGLELVHESSSQDEENE 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00810 834 Gene3D Phosphorylase Kinase; domain 1 475 591 - -
Aip04g00810 834 ProSiteProfiles Protein kinase domain profile. 516 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00810 834 SUPERFAMILY Protein kinase-like (PK-like) 493 788 IPR011009 -
Aip04g00810 834 Gene3D - 218 400 - -
Aip04g00810 834 Gene3D - 29 195 - -
Aip04g00810 834 Pfam Protein tyrosine and serine/threonine kinase 521 783 IPR001245 GO:0004672|GO:0006468
Aip04g00810 834 PANTHER OS07G0166700 PROTEIN 22 831 IPR045272 GO:0004714|GO:0006468
Aip04g00810 834 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Aip04g00810 834 MobiDBLite consensus disorder prediction 810 834 - -
Aip04g00810 834 Gene3D Transferase(Phosphotransferase) domain 1 592 805 - -
Aip04g00810 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Aip04g00810 834 CDD STKc_IRAK 522 787 - -
Aip04g00810 834 Pfam Malectin-like domain 35 398 IPR024788 -
Aip04g00810 834 SMART serkin_6 516 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g00810 834 MobiDBLite consensus disorder prediction 817 834 - -
Aip04g00810 834 PANTHER OSJNBA0058K23.13 PROTEIN 22 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00810 Aip-Chr4 10640427 10643962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00810 11 817 Receptor kinase-like Gene Family AT1G30570 64.382 0.0 1090
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g00810 Malectin_like 2.2e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00810 - - gmx:100791403 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00810 04 10640427 10643962 Aip04g00810 04 10640427 10643962 ECH