Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00806 CCTTTCTTTTCAGTGATTGGTATCTCGAGTGGTTGTTAGCCATTGCGTTTGTTGGTGGAATAGCCGCACCTCTGAACTATCGCTGGGGTTTTGAAGAGGCGAAATTCGCAATGACTGTGGTGAAGCCAGTGATGTTAGTCACTGATGAGAGCAGCCAAACATGGTACTCAAAACTTCTGAAAACGGATGTTCCATCTCTGAGATGGCATGCTTTATTGGATTCCACTTCCTCAGATTTAGCAAAGCAGTGGAATGATATTGCTGTGTTGCACTCAGAAATGCTCAAGAAGCATCGTGTAAAGCCTCTACCATTTGATTATTCCTGGGCACCAGACGGTGCTGTAATGATATGCTTTACTTCAGGAACAACAGGAAAGCCTAAAGGAGTAACACTAAGCCATGGAGCATTGATCGTACAATCACTAGCAAAGATTGCCATAGTTGGATACAATGAGGATGATGTTTATCTGCATACTACTCCATTATGCCATATTGGGGGATTGTCATCGGCTTTGACCATGCTTATGGTTGGAGGTTGCCATGTCTTGATGCCGAAGTTCGATCCAAAATTAGCTGTTGATGCCATAGAGCGATACGGGGTGACATCTCTTATCACAGTCCCTGCAATAATGGCCGGTCTCATTTCTCTAATTAGGCATGTGCCAACATGGAAAGGGGGAGAAACCGTAAAGAAAATACTTAATGGGGGTGGAAGCCTCACACTTGAGCTCATCAAGGATACTAACTTATTCTTCCGTAAAGCTAAGCTTATCTCAGCTTATGGGATGACAGAGACATGTTCTTCAATGACATTCATGAACCTTTATGATCCAATGCATGAAACCACCATTAGCCAGAACCTTCAAATAGTTGGTGAGGCAGCATCATCAAATTCCATTCACCAGCCTCAAGGTATATGTGTTGGCAAAGCTGCACCTCATGTAGAACTTAAAATATGCGAAGATGATGGCACTAGTCACATAGGGAGAATTTTAACTAGAGGACCACACACAATGCTCAGGTATTGGGATCAAACTCTCACAAGTTCATCAAATGGCAGGAGTGAAGCATGGTTTGATACAGGTGACATTGGATCAATTGATAATCATGGTAATTTGTGGCTCCTTGGACGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAAGCAATTCTACAAGGACATCCAGGGATTACAAGTGTTGTTGTTGTAGGAATCCCAGATGCCTATCTTACAGAAATGGTAGCAGCATGTATCCAACTAACAGAAAATTGGCAATGGTTAGATCAATCTAATTCAAATCAAGAGTTTCACATATCTAAAAGGAGTCTCCACCAATATTGTATTCAACATAATCTAAGCAGGTTTAAGATACCAAAGATGTTTGTACTGTGGGGAAAGCCTTTTCCACTCACTACCACAGGAAAAgtGCGCCCCGTCCGGGGGCATCATCCTTTTTGGCTGACGTTAGAAGGCCAACGTCAGTTCCCGACATATTGGAACTTCGGCGCCGGGCTGTCGGTTTTGACGAAAGTCACATATGATGGTTTGTCTCTGGAGGATAAGGATATTGCTGGTATCCTCTGGCATCTGTTTGGGGAACGACCGTTGAATCCCCGGGACGTCATGGGGGATCCCGTGGCCTGCCGAACATATATTGGTGTGTGA 1688 0.4384 FLFSDWYLEWLLAIAFVGGIAAPLNYRWGFEEAKFAMTVVKPVMLVTDESSQTWYSKLLKTDVPSLRWHALLDSTSSDLAKQWNDIAVLHSEMLKKHRVKPLPFDYSWAPDGAVMICFTSGTTGKPKGVTLSHGALIVQSLAKIAIVGYNEDDVYLHTTPLCHIGGLSSALTMLMVGGCHVLMPKFDPKLAVDAIERYGVTSLITVPAIMAGLISLIRHVPTWKGGETVKKILNGGGSLTLELIKDTNLFFRKAKLISAYGMTETCSSMTFMNLYDPMHETTISQNLQIVGEAASSNSIHQPQGICVGKAAPHVELKICEDDGTSHIGRILTRGPHTMLRYWDQTLTSSSNGRSEAWFDTGDIGSIDNHGNLWLLGRTNGRIKSGGENIYPEEVEAILQGHPGITSVVVVGIPDAYLTEMVAACIQLTENWQWLDQSNSNQEFHISKRSLHQYCIQHNLSRFKIPKMFVLWGKPFPLTTTGKVRPVRGHHPFWLTLEGQRQFPTYWNFGAGLSVLTKVTYDGLSLEDKDIAGILWHLFGERPLNPRDVMGDPVACRTYIGV 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00806 561 CDD AFD_class_I 111 484 - -
Aip04g00806 561 ProSitePatterns Putative AMP-binding domain signature. 116 127 IPR020845 -
Aip04g00806 561 Pfam AMP-binding enzyme C-terminal domain 393 482 IPR025110 -
Aip04g00806 561 Pfam AMP-binding enzyme 7 384 IPR000873 -
Aip04g00806 561 Gene3D - 381 487 IPR045851 -
Aip04g00806 561 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 4 484 - -
Aip04g00806 561 Gene3D - 4 377 IPR042099 -
Aip04g00806 561 SUPERFAMILY Acetyl-CoA synthetase-like 6 484 - -
Aip04g00806 561 PANTHER ACYL-COA SYNTHETASE 4 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00806 Aip-Chr4 10538461 10547503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00806 11 411 Monolignol Biosynthesis Gene Families AT3G21240 28.883 1.65e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00806 K14760 - gmx:100809925 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00806 04 10538461 10547503 Aip04g00806 04 10538461 10547503 ECH